KEGG   Emys orbicularis (European pond turtle): 135882184
Entry
135882184         CDS       T11511                                 
Symbol
LAMC1
Name
(RefSeq) laminin subunit gamma-1
  KO
K05635  laminin, gamma 1
Organism
eob  Emys orbicularis (European pond turtle)
Pathway
eob04510  Focal adhesion
eob04512  ECM-receptor interaction
eob04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:eob00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    135882184 (LAMC1)
   04518 Integrin signaling
    135882184 (LAMC1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    135882184 (LAMC1)
SSDB
Motif
Pfam: Laminin_N EGF_laminin EGF_LMN_ATRN Laminin_B Alanine_zipper
Other DBs
NCBI-GeneID: 135882184
NCBI-ProteinID: XP_065265069
LinkDB
Position
8:complement(56411578..56548248)
AA seq 1594 aa
MGRGVLPLLLLLELAGRCAAAMDECVDEASGRPQRCMPEFVNAAFNVTVVATNTCGSPAE
EYCVQTGVTGVTKSCHLCDAAQPHLQHGAAFLTDYNQADTTWWQSQTMLAGVQYPSAINL
TLHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWVPYQYYSGSCENTYQKLNRGFIR
TGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSAVLQEWVTATDIRVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNDFGKLSCNCKHNTFGED
CEKCLPFYNDRPWRRATAESANECLSCNCNGRSQECYFDAELYRSTGHGGHCIGCFDNTD
GANCERCRENFYRLGSEEGCLPCNCNAVGSLSTQCDNYGRCSCKPGVMGDKCDRCQPGFH
SLSEAGCRLCSCNPAGSTDDCSIETGRCTCKDNVEGFHCERCKPGFFNLDPANLRGCTPC
FCFGHSSVCTNAVGYSIYSIVSNFQTGEEEWRAEQRDGSEILLQWSVETQDISVISDSYF
PIYFIAPGKFLGNQVLSYAQNLTFSFRVDRRDTRLSAEDLVLEGAGLRVSVPLIAQGNSY
PSENTVKYAFRLHEATDYPWRPSLTPFEFQKLLYNLTSIKIRGTYSERNAGYLDDVTIVS
ARPEPGTPATWVESCTCPAGYHGQFCEHCAPGYRRETPSLGPFSLCVLCTCNGHSESCDP
ETGACDCRDNTAGPHCEKCSDGYYGDATTGISSDCQPCPCPGGSSCAVVPKTKEVVCTNC
PAGTTGKRCELCDDGYFGDPLGENGPARLCRLCQCSDNIDPNAVGNCNRLTGECLKCIYN
TAGFYCDQCKDGFFGNPLASSPEVKCKACSCNPYGTVNQQTNCNQVTGQCECLPRVTERD
CSACEPGFYNLQSGRGCDRCDCHPLGSTDGHCDIQTGQCECQPGITGQRCERCEVNHFGF
GPEGCKPCDCDTEGSRSLQCKEDGRCECKEGFVGSRCDQCEENYFYNRSWPGCQECPACY
RLVRDKVAEQRERLQELENLIANLGTGDETVTDQAFEDRLKEAERDVMDLLRDAQNSKDV
DQGLMDRLKEINSTLASQLGRLQNIQNTVRETEGLAEQARDRVEGTEDLIEVASNMLEKA
KIAVANVSITPPVSNGDPNNMTLLAEEARKLAERHKQEADDIVRIAKAANDTSTEAYTLL
LKTLAGENQTASDIDELNRKYNQAKNISRDLEKQANKVHAEAEEAGNKALQIYANLTSLP
AVDSKGLENEANKIKKEAEELDQLIDRKLKDYEDLREDMKGKELEVKNLLEKGRTEQQTA
DQLLARADAAKALAEEAAKKGRETLEEANDILSNLRDFDKRVNDNKTAAEGALKKIPAIT
RTIAEANNKTRQAELALGNAADDAREAKNKADDAEKIANSVQKNAASTKSEADKTFSDAT
ELDKEVDDMLKQLQDAEKELKRKQEDADQDMMMAGMASQAAQEAEDNARKAKNSVNSLLT
IINELLGQLGQLDPVDLNKLNEIEGTLNTAKDQMKDSDLDRKVTELEDAARRQDEAIQAY
NRDIEDILKDINNLEDIKKTLPSGCFNTPSIEKP
NT seq 4785 nt   +upstreamnt  +downstreamnt
atgggtcgcggggtgctgcctttgctgttgctgctggagctggccgggcgctgcgccgcc
gccatggacgaatgcgtggacgaggcgagcgggcggccgcagcgctgcatgcccgaattc
gtgaacgccgccttcaacgtgaccgtggtggccaccaacacgtgcggctcgccggccgag
gagtactgcgtgcagaccggcgtgaccggggtcaccaagtcctgccacctgtgcgatgcc
gcccagccccacctgcagcacggcgccgccttcctcaccgactacaaccaggccgacacc
acctggtggcagagccagaccatgctggctggggtgcagtaccccagcgccatcaacctc
accctgcacctgggaaaggcctttgacatcacatatgtgcgcctgaagttccacaccagc
cggcctgagagctttgccatctacaaacgtaccagggaagatggtccgtgggtgccttac
cagtactacagtggctcttgcgagaacacgtatcagaaattaaaccgaggctttatccgg
actggggaggatgaacagcaggcactctgcacggatgagttcagtgacatctctccactc
acaggtggcaatgtggctttttcaacactggaggggcggcccagtgcctacaattttgac
aacagtgctgtgttacaggaatgggtgacggctactgacatccgagtgaccctcaatcgt
ctgaacacctttggagatgaagttttcaatgatccaaaagttctcaagtcctattattat
gcaatttctgattttgctgtgggtggcaggtgcaagtgcaatggccatgcaagcgagtgt
gtgaagaatgactttgggaagctatcgtgtaactgcaaacacaacacttttggggaagac
tgcgagaagtgccttcccttctacaatgacaggccatggagaagagcaacagcagagagt
gccaatgaatgtttgtcctgtaactgcaatgggcggtcacaggagtgttactttgatgct
gaactgtaccgctccacgggccatggtggtcactgcattggctgcttcgataatactgat
ggtgccaactgtgaaaggtgccgggagaacttctaccgccttggaagtgaggaaggatgt
ctaccatgtaactgtaacgctgttggctctctcagcactcagtgtgataactacggccgg
tgcagctgcaaaccaggagtgatgggagataaatgtgaccgatgccagccagggttccat
tccctctcagaggctgggtgcaggctatgttcatgcaatcctgctggcagcacagatgac
tgcagtattgaaacagggcgatgtacctgcaaggacaacgtggagggattccactgtgag
agatgtaaacctggatttttcaatctggatccagccaatctgaggggctgcaccccttgc
ttctgttttggtcactcctcggtctgcaccaatgccgttggctacagtatctacagcatc
gtctccaacttccagactggggaggaagagtggcgtgctgaacagcgagatggctctgaa
attttactccagtggagtgtggaaacccaggacatctctgttatctcagacagctatttc
cctatctatttcattgcaccgggcaagtttttgggcaaccaagttttgagttatgctcaa
aatctgaccttctcctttcgggtggataggcgggacactcgtctctctgcagaggacctg
gtgcttgaaggggctgggcttagagtatctgtgcctcttattgctcagggcaattcctat
cctagcgagaacacagtgaagtatgccttcaggctccatgaagcaacagattacccgtgg
aggccttctcttaccccatttgagtttcagaagctgctttacaacttgacttctatcaag
atccgtggaacatacagtgagagaaatgctggatacctggatgatgtcactattgtgagc
gctcgtcctgagcctggaacccctgcaacctgggtggagagctgcacctgcccagcagga
taccatgggcaattctgcgagcactgtgccccaggttataggagggagacacctagcctt
gggccattcagtctgtgtgtgctgtgtacctgtaatgggcacagtgagagctgtgaccca
gagactggtgcttgcgactgcagagataacactgcaggccctcactgtgagaagtgtagt
gatgggtattacggagatgcaactacaggcatttcctcagactgtcagccatgtccatgt
ccagggggctccagctgcgccgtcgtgcccaagactaaggaggtggtgtgcaccaattgt
cctgctggtaccacaggtaaaagatgtgagctatgtgatgacggctattttggagatcca
cttggtgaaaatggccctgccaggctttgccgtctctgccaatgcagtgacaacattgat
cccaatgccgtggggaactgtaaccgcttgacaggggaatgcctgaaatgcatctacaac
acagctggcttctactgtgaccagtgcaaagatggtttttttgggaaccccttagcctcc
agccctgaggttaaatgcaaggcgtgcagttgtaatccttatggcacagtaaaccagcag
acaaactgcaatcaagtaactgggcagtgtgagtgcctgccacgtgtcactgagagggac
tgtagtgcctgtgagcctggcttctacaacctacagagtggacgtggctgtgacaggtgc
gactgccatccgctgggttccaccgatggccattgtgacatacaaacagggcagtgtgag
tgtcaaccaggcatcaccgggcagcgctgtgagagatgtgaggtcaaccacttcggattc
ggacctgaaggctgcaaaccatgtgactgtgacaccgagggctctcgctccctgcagtgc
aaggaggatggtcgctgtgaatgtaaggaaggctttgtggggagccgttgtgaccagtgt
gaagagaattatttctacaatcggtcctggcctggctgtcaagaatgtcctgcgtgctat
agactggttagagataaggtggcagaacaacgcgagaggttgcaggagctggaaaatctt
atagcaaaccttggtacaggagatgaaacggtgactgatcaggcctttgaggacagactg
aaggaggcagagagagatgtcatggacttgctccgagatgcacagaacagcaaagatgtg
gatcagggcctgatggatcgtctcaaggaaattaacagcactctggcaagccagcttggc
cgattacagaacatccaaaatacagtgagggagactgaaggcctagctgagcaagcccga
gaccgggtggagggcacagaagacctgattgaagtagcttctaatatgctagagaaggca
aagatagcagttgccaatgtgtccattaccccaccagtctccaatggtgacccaaacaac
atgactctcttggcagaagaggctcgtaaactggctgaacgacacaaacaagaagctgac
gatattgtgcgcatagcaaaggcagcaaatgatacatccacagaagcgtatacattgcta
ttgaagacactggcaggagagaaccaaactgcgagtgacatagatgagctcaacaggaag
tataatcaagcaaagaacatttctcgagacctagagaaacaggctaacaaggtgcatgca
gaggcagaggaagctgggaacaaggccctgcagatctatgctaacctcaccagtcttcct
gctgtggactccaagggtctagagaatgaggcaaataagatcaagaaggaagcagaggag
ctggatcagctcattgacaggaagttgaaggattatgaggatttgagagaggacatgaaa
gggaaggagctggaagtgaagaatctcttggagaaaggaaggactgaacaacagactgcc
gaccagctgctggcccgagcagatgctgccaaagctctggctgaagaagctgccaagaag
ggaagagagacgctagaggaggccaatgacattctcagcaatctgagagattttgacaag
cgtgtgaacgataacaagacagctgccgagggggcgctaaagaagattcctgccattact
cgaaccattgctgaggccaataataagacaaggcaagcagagctggcgcttggtaatgct
gctgatgatgccagggaagccaagaacaaagcagacgatgctgagaaaattgctaattct
gtccagaagaatgctgccagtacaaagtctgaggccgacaagactttctctgatgcgaca
gagctagacaaagaagtggatgacatgctgaaacagctgcaagatgcagagaaggagctg
aagaggaagcaggaggatgctgatcaggatatgatgatggcaggcatggcttcacaggct
gctcaagaggcagaagacaatgcgagaaaagctaagaactctgttaacagcttgctcacc
atcattaatgaacttctgggacagttagggcaactggacccagtggacttgaacaaactg
aatgagatcgagggtaccttgaacacggccaaagatcagatgaaagatagtgacctcgac
cggaaagtgaccgaattggaggatgcagccaggcggcaggacgaagccatacaggcctac
aacagggacattgaggatatcctgaaagacattaacaacctggaagatatcaagaagacc
ttgccgtctggctgtttcaacaccccgtccatcgagaaaccctaa

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