Emys orbicularis (European pond turtle): 135882327
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Entry
135882327 CDS
T11511
Symbol
RXRG
Name
(RefSeq) retinoic acid receptor RXR-gamma isoform X1
KO
K08526
retinoid X receptor gamma
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob03320
PPAR signaling pathway
eob04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
135882327 (RXRG)
03320 PPAR signaling pathway
135882327 (RXRG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eob03000
]
135882327 (RXRG)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
eob03310
]
135882327 (RXRG)
Transcription factors [BR:
eob03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
135882327 (RXRG)
Nuclear receptors [BR:
eob03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
135882327 (RXRG)
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Paralog
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
135882327
NCBI-ProteinID:
XP_065265287
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Position
8:complement(64319552..64373727)
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AA seq
467 aa
AA seq
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MYGNYPHFIKFPAGFGNSPVHTSSTSVSSSSSFSPGNSVDGHPSYMEAPVSASRTLASPM
NTIGSPASALGSPYRVIASSIGSHSVSLSSAPGMNFVAHTSPQLNVMNNASSSEDIKPLP
GLPGIGNVNYPSTSPGSLAKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCR
DNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRSRERSENEAESTSNGNEDMPV
ERILEAELAVEPKTESYSDVNAENSTNDPVTNICHAADKQLFTLVEWAKRIPHFSELTLE
DQVILLRAGWNELLIASFSHRSVTVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVS
KMKDMQMDKSELGCLRAIVLFNPDAKGLSSPFEVESLREKVYATLEAYTKQKYPEQPGRF
AKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLETPLQIT
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtatgggaattatcctcacttcattaagtttcctgctggctttggcaattcccccgtt
cacaccagttctacatcggtgagctcatcatcaagcttttccccagggaattcagtggat
ggccatcccagctacatggaggctccagtgagtgcttcgaggactcttgcgtctccaatg
aacacgatagggtcgcctgcaagtgcgctaggctcgccatacagagtcatcgcttcgtcc
attggatctcattctgtttccctgtcttcagctcctggcatgaattttgtggcgcacacc
agccctcagctcaatgtcatgaacaatgccagcagctctgaagacattaagcccctgcca
ggcctcccagggattggaaacgtgaattatccctccactagcccagggtccctggccaaa
cacatctgtgcaatctgcggggacagatcatcagggaagcactacggggtgtacagctgt
gaaggctgtaaagggttcttcaagaggacaataagaaaggaccttatctacacatgccgc
gataacaaagactgtctaatagacaagcgtcagcgcaaccgctgccagtactgccgctat
cagaagtgcctggctatgggtatgaagagagaagctgtgcaagaggagagacagagaagc
cgagagcgcagcgagaatgaagccgagtccacgagcaacggcaatgaggatatgcctgtg
gagaggattttagaagctgaactggctgttgaaccaaagacggaatcgtacagcgacgtg
aatgctgagaactcgacaaatgaccctgtcaccaatatatgtcatgcagcagacaagcag
ctcttcaccttagttgaatgggccaagcgaatcccccacttctcagagctgacgctggaa
gaccaagtgattcttctgcgggcaggttggaatgagctgctcattgcctcgttctcccat
cgctcggtgaccgtgcaagatggcatcctgctcgccacaggcttacatgtgcaccgcagc
agcgcgcacagtgccggcgtgggctccattttcgacagagttctgacagaattagtgtct
aaaatgaaagacatgcagatggataagtctgagctgggatgcctgcgagccattgtcctg
tttaacccagatgccaagggcttgtccagtcccttcgaggtggagtccctgcgagaaaag
gtctatgccacgctcgaagcatatacaaagcagaagtaccctgaacaacctggaagattt
gccaaactcctcctccggctgccggcgctgagatccatcgggctgaaatgcctcgagcac
ctcttcttcttcaagctgatcggggacacgcccatcgacacctttctcatggagatgctc
gagaccccactccagatcacctga
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