Emys orbicularis (European pond turtle): 135882334
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Entry
135882334 CDS
T11511
Symbol
RBM22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135882334 (RBM22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eob03041
]
135882334 (RBM22)
Spliceosome [BR:
eob03041
]
Complex B
Other components
Prp19-related factors
135882334 (RBM22)
Complex C
135882334 (RBM22)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_3
zf-CCCH_10
zf-CCCH_12
zf-CCCH_PARP12
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
135882334
NCBI-ProteinID:
XP_065265298
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All DBs
Position
8:complement(107675531..107687615)
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AA seq
420 aa
AA seq
DB search
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSFKDDMPKSDVNKEYYTQN
MEREISNSDGTRAVGALGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPDDKTITTLYVGGLG
DTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNV
KWGRSQAARGKEKEKEGTTESGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAV
VNIALPPPPGIAPPPPPGFGPHMFHTMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHNTP
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtctctgggctccaacacctacaaccggcagaactgggaggacgcggacttc
cccattctgtgtcagacatgccttggagaaaacccttatatcagaatgaccaaagagaaa
tatggaaaagaatgcaagatttgtgccaggcccttcacagtgtttcgctggtgcccaggt
gttcgaatgcgctttaagaagacagaagtgtgccaaacatgtagcaagctgaagaatgtg
tgtcagacctgcctgcttgacctggaatatggtctacctattcaggttcgagatgcagga
ctctcttttaaggatgacatgcctaaatctgatgtcaataaagagtattacacccagaac
atggagagagaaatttcgaactctgatggcacaagagcggttggtgctctaggaaaagct
acttctaccagtgacatgctgcttaaactggctcggaccaccccttactataaacgcaac
cgaccccacatctgttccttttgggtgaaaggagaatgcaagagaggggaagagtgtccc
tacagacacgagaaacctacagacccagacgatcctctggccgatcagaacatcaaagat
cgttactatggtattaatgaccctgtagctgataagcttctgaaacgggcttcaaccatg
cctcgtctggacccacctgatgacaagaccattaccacgctatacgtaggaggcctggga
gataccatcaccgagactgatctgagaaatcacttctaccagtttggggagatccggacg
ataaccgtggtacagaggcagcagtgtgcattcatccagtttgccacacggcaagctgcg
gaagtggctgctgagaaatcctttaacaagcttattgtcaatggacgcagactcaatgtc
aagtgggggaggtcccaagcagcaagagggaaagagaaggagaaagaaggtactacagaa
tctggtataaagctggagccagtcccaggactacctggagctcttccccctcctccagct
gcagaagaagaggcgtctgcaaattacttcaacctacctcccagtggccctccagccgtg
gttaacattgccctgcccccacctcctggcattgctccgcccccacctccaggttttgga
ccacacatgttccacaccatggggcctccacctcccttcatgagagccccaggccccatc
cactacccttctcaagatccacagaggatgggtgcccacgctgggaagcacaacactccc
tag
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