Emys orbicularis (European pond turtle): 135882509
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Entry
135882509 CDS
T11511
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135882509 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eob03041
]
135882509 (PRPF38B)
Spliceosome [BR:
eob03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
135882509 (PRPF38B)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
135882509
NCBI-ProteinID:
XP_065265513
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All DBs
Position
8:43644845..43655880
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AA seq
545 aa
AA seq
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MANNSPAVGAGNCQQQQAAQHQAGSVPPAQPPLQSGAPKPAASGKQGNVLPLWGNEKTMN
LNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVR
GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDW
FESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRP
RKIKKDAKEGVEEVDRHAERRRSRSPRRSVSPRRSPRRSRSRSHHREGHGSSSFDRELER
ERERQRLEREAKEKEKERRRSRSTDRALERRRSRSRERHRSRSRSRDRKGDRRDRDRERE
KENERSRKKDRDYDKEKGNERERSRERSKDRKSKGEIEEKRHKDDKDEKKHRDDKKDSKK
DRKHSRSRSRERKHRSRSRSKNTGKHSRSRSKEKLSKHKNESKDKSNKRSRSGSRGRTDS
VEKSRKRDHSPSKERSRKRSRSKERSLKHDHSDSKDHSDKHDRRRSQSTERESQEKQHKN
KDETV
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaatagccccgcggtaggcgccggcaactgccagcagcagcaggcggcccag
caccaggccggatccgtcccgccggcccagccgccgctccagagcggggcccccaaaccg
gcggcctcaggcaagcagggcaacgtgctgccgctgtgggggaacgagaagaccatgaac
ctgaaccccatgatcctcaccaacatcctctcctcgccctacttcaaggtgcagctctac
gagctcaagacctaccacgaggtggtggacgagatttacttcaaggttacacatgttgaa
ccatgggagaaagggagcagaaaaacagcaggccagacagggatgtgcggaggggtgcga
ggtgttggaactggaggaattgtgtctacagctttttgcctgctatacaaattatttact
ctaaaactcactcgtaagcaagtgatgggcctcattacacacacagattctccgtacatt
agggctcttggatttatgtatattaggtacacacagcctcctactgatctatgggactgg
tttgaatcgttccttgatgatgaagaggacctggatgtgaaggcaggtgggggttgtgtt
atgaccattggggagatgcttcgttcctttcttactaagctcgaatggttttcaacattg
tttccaagaattcctgtgccagtccagaaaaacattgatcagcaaataaaaaccagacct
agaaaaatcaagaaggatgccaaggagggagtggaagaagtagaccgacatgcagagcgt
agacgttcaaggtctccaagaaggtctgtgagccccaggaggtctcctagaagatccaga
agcagaagtcatcatcgggaaggccatggatcatctagttttgatagagaactagaacgg
gagagagaacggcagagattagaacgtgaagctaaggagaaagaaaaagaaaggcgaaga
tcacgaagtactgatcgtgcattagagcggaggcgaagcagaagcagagagagacacaga
agccgtagtcgaagtcgtgatagaaagggagatagaagagacagggatagagagcgggag
aaagaaaatgaacgaagcaggaaaaaagatagagactatgacaaggaaaagggtaatgaa
agagagagatcgagggaacggtcaaaagacaggaaaagtaagggtgaaatagaagagaaa
agacacaaagatgacaaggatgaaaagaagcacagggatgataagaaagattccaaaaaa
gacagaaaacatagcagaagccgaagcagggagaggaagcataggagtaggagtagaagt
aagaatacaggtaagcacagtagaagcaggagcaaggagaaattaagtaaacataaaaat
gaaagtaaagataaatcaaataaacgaagtagaagtggaagcagaggaagaaccgatagt
gttgaaaagtccagaaaacgagaccacagtcccagcaaagagagatcccgaaagcgtagt
agaagcaaagaacgatcccttaaacatgatcacagtgatagcaaggaccattcagacaaa
catgatcgtagaaggagccaaagtacagaacgagagagccaagaaaagcaacataaaaac
aaagatgagactgtgtga
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