Emys orbicularis (European pond turtle): 135883116
Help
Entry
135883116 CDS
T11511
Symbol
EBF1
Name
(RefSeq) transcription factor COE1 isoform X1
KO
K09103
early B-cell factor
Organism
eob Emys orbicularis (European pond turtle)
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eob03000
]
135883116 (EBF1)
Transcription factors [BR:
eob03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
135883116 (EBF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
GEP3_N
Motif
Other DBs
NCBI-GeneID:
135883116
NCBI-ProteinID:
XP_065266232
LinkDB
All DBs
Position
8:complement(111674492..111994561)
Genome browser
AA seq
604 aa
AA seq
DB search
MFGIQESIQRSGSSMKEEPLGAGMNAVRTWMQGAGVLDANTAAQSGVGLARAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTAFVGFVEKEKEANSEKTNNGIHYRLQLLYSNGI
RTEQDFYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKH
GRRARRLDPSEGTPSYLEHAATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVIFGTML
VWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRL
QKVIPRHPGDPERLPKEVILKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHN
QLPALANTSVHAGMMGVNSFTGQLAVNVSEASQATNQGFTRNSSSVSPHGYVPSTTPQQT
NYNSVTTSMNGYGNAGMSNLGGSPTFLNGSAANSPYAIVPSSPTMASSTSLPSNCSSSSG
IFSFSPANMVSAVKQKSAFAPVVRPQTSPPPACTSTNGNSLQDQSFVDSSKYSTAGSLQG
LAFS
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggatccaggaaagcattcagcggagtggcagcagcatgaaggaagagcccctg
ggcgcggggatgaacgcggtcaggacctggatgcagggagccggcgtcctggatgcaaac
acagccgcgcagagcggagtggggctggcccgggctcacttcgagaagcagcccccctcc
aacctgaggaaatccaacttcttccacttcgtcctggctctgtacgacaggcaggggcag
ccggtggagatcgagcgcactgccttcgtgggcttcgtggagaaggagaaagaagccaac
agcgaaaagaccaataacgggatccattaccggctgcagctactctacagcaacgggata
agaaccgagcaggatttctacgtccgcttaatcgactccatgaccaaacaagcgatagtg
tacgaaggccaagacaagaacccagaaatgtgcagagttcttctcacacatgaaataatg
tgcagccggtgttgtgacaagaaaagctgtggcaacagaaatgagactccatcagatcca
gtgataattgacaggttcttcttgaaattttttctcaaatgtaaccaaaattgcctaaaa
aatgccggaaacccccgggacatgcggagattccaggttgtggtgtcgacaacagtcaac
gtggacggccatgtgttggcggtgtcggacaatatgtttgtacacaacaactccaagcac
gggcggagggctcgacggcttgatccctcggaaggtacgccttcttatctggaacatgca
gctacaccatgtatcaaagctatcagcccgagtgaaggatggactacaggaggtgccact
gtcatcatcataggagacaatttctttgatgggttacaggtcatattcggcaccatgctg
gtctggagtgagctgattacccctcatgcaatccgagttcagacacctccccgacatatc
cctggcgtggtagaagtcacattgtcctacaagtctaagcagttctgtaagggaacacct
ggaagattcatttacacagccctgaacgagcccaccattgactacggtttccaaaggtta
cagaaggttatcccacggcaccctggtgaccctgaacgcttgccaaaggaagtgatactg
aagagggctgctgatttagtggaagcgctctatggtatgccacataataaccaggaaatc
attctgaaaagagcagcggatattgcagaagcactgtacagtgttccccgcaatcacaac
cagctcccagcacttgctaacacgtcagtccatgcaggaatgatgggagtgaattccttt
actggtcagctagcagtcaacgtctcggaagcctcacaggccaccaatcagggttttact
cgcaactcaagcagtgtgtcacctcatgggtatgtgccaagcaccacccctcagcagaca
aactacaactccgtcacaacaagcatgaacggctatgggaatgctggaatgtcaaattta
ggtggttctccaaccttcctcaatggatctgctgccaattctccctatgccatcgtgcca
tcaagtccaacaatggcctcctccactagcctcccatcaaactgtagcagttcctctggg
attttctccttctcaccagccaacatggtctcagcggtgaaacagaagagtgcgtttgcc
cctgtcgtgagaccgcaaacttccccacctcccgcctgcaccagcaccaatggcaatagc
ctgcaagaccagtcttttgtggactctagcaagtactccactgcagggtctctccagggg
ctggccttctcctga
DBGET
integrated database retrieval system
