Emys orbicularis (European pond turtle): 135883395
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Entry
135883395 CDS
T11511
Name
(RefSeq) nuclear cap-binding protein subunit 2 isoform X1
KO
K12883
nuclear cap-binding protein subunit 2
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob03013
Nucleocytoplasmic transport
eob03015
mRNA surveillance pathway
eob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135883395
09122 Translation
03013 Nucleocytoplasmic transport
135883395
03015 mRNA surveillance pathway
135883395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eob03019
]
135883395
03041 Spliceosome [BR:
eob03041
]
135883395
Messenger RNA biogenesis [BR:
eob03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
135883395
Spliceosome [BR:
eob03041
]
Common components
Common spliceosomal components
Cap binding complex
135883395
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
135883395
NCBI-ProteinID:
XP_065266543
LinkDB
All DBs
Position
9:complement(939203..943760)
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AA seq
168 aa
AA seq
DB search
MSGVLSATLSGLNSDSYCEISQYRDQHFRGSRYLQEKALKFSCTLYVGNLSFYTTEEQIQ
ELFSKCGDVKRIVMGLDKVKKTPCGFCFVEYYTRADAEHAMRFINGTRLDDRIIRTDWDA
GFKEGRQFGRGKTGGQVRDEYRTDYDVGRGGFGKIIQMQKTNHQTIIY
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggggtgctgagcgccacgctgagcggcctcaacagcgactcctactgcgagatc
agccagtaccgggaccagcacttccggggtagccgatacctacaggagaaggccctgaag
ttctcttgcacactgtatgtggggaacctgtccttttacaccaccgaggagcagatccag
gagctcttctccaaatgcggagatgtcaagaggattgtcatggggctagacaaggtcaag
aaaaccccttgtggcttctgctttgtggaatattacacaagagcagatgctgagcatgca
atgaggtttatcaatggcacccgactggatgaccggatcatcaggactgactgggatgca
gggtttaaggagggacgacagtttgggagaggaaagactggaggacaggtgcgagacgag
taccggacagactatgatgtgggaagaggtggctttggcaagatcattcagatgcagaaa
accaatcaccagactataatctactaa
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integrated database retrieval system
