Emys orbicularis (European pond turtle): 135883403
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Entry
135883403 CDS
T11511
Symbol
NUP62CL
Name
(RefSeq) nucleoporin-62 C-terminal-like protein
KO
K14306
nuclear pore complex protein Nup62
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135883403 (NUP62CL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eob03019
]
135883403 (NUP62CL)
Messenger RNA biogenesis [BR:
eob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135883403 (NUP62CL)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
DUF4164
Nup188_C
Motif
Other DBs
NCBI-GeneID:
135883403
NCBI-ProteinID:
XP_065266559
LinkDB
All DBs
Position
9:40261715..40279881
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AA seq
570 aa
AA seq
DB search
MSQFNFGSASAGGGFNFGTPKTAATTAPTGYSFTPGSGTGFSFGTPTQTPASTQSTGLFS
LATPATSAQASGFSFGSPATSTAAPAGNVFSLGGSVPKLNLGSSGTPQTTGITGGFGLAN
STALTSSIPSSVSSSQVAAPSGFVFGPTTTTTAQAGTTGGFNFASSGTAQTGTPNFNISS
VGNTTQQVAPTGLTFGAAPAAATIAPTTAQPATAFSLGGQSTGLNFGILASTAATSAPTG
TLTATTIQGPSLSFGTKLGGLTATSTAPTTTASLLGSSGPTLFASIASSSAPNSSAATGL
SLGGTSTAATSLGTLGFGLKVPGTTTAATITTTSTSSAPSTGFALNLKPLTTTGTIGAVT
STATIATTTTSAPPVMTYAQLESLINKWSLELEDQEKHFLHQATQVNAWDRTLIENGEKI
TSLHREVEKVKLDQKRLDQELDFILSQQKELEDLLIPLEESVKEQSGTIYLQHADEERER
TYKLAENIDAQLKRMAQDLKDIIEHLNTSGGPADTSDPLQQICKILNAHMDSLQWIDQNS
ALLQRKVEEVTKVCESRRKEQERSFRITFD
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagtttaactttggatctgcttctgctgggggagggttcaactttggcactcca
aagacagcagccaccacagcaccgacaggctattccttcacacctggcagtggaacagga
ttcagttttgggacaccaactcagaccccagcaagcacccagtctacaggtctgttctcc
ctggccacccctgctacatctgcacaggcttctggattcagttttggatcaccagccaca
tcaactgcagccccagcaggaaatgtattctcgttagggggaagtgtaccaaagttaaac
ttgggcagcagtggcacccctcagactacaggaatcactggggggtttggacttgctaac
agtaccgcccttaccagctctataccaagcagtgtgtcttcaagtcaagtagcagctcct
tctggctttgtttttggccccactaccaccaccactgctcaggctgggacaactggaggg
ttcaactttgccagcagcggaacagctcagactggaaccccgaactttaatatcagttct
gtgggaaatacaactcagcaagtagcacctacagggttaacctttggagcagccccagct
gctgccaccattgcaccaactactgcacaaccagccactgccttcagtcttgggggacag
tccacaggtttaaattttggaatactggcctcgacagcagccacctctgcacccacagga
acattgacagctactaccatccagggacctagtttatcatttggaaccaaactcggaggc
ttgactgcaacatccacagctcctaccaccacagcttcccttcttggttcatctgggcct
actttgtttgcatccatagcaagttcttcagcgccaaactcctctgctgccacaggcctc
tcacttggtggcacctcaactgcagcaaccagtctgggtactcttggatttggattaaag
gtccctggaacgacgactgctgcaaccatcactaccacgagcacttcttctgcccctagc
acaggctttgccttgaatcttaaaccactgaccaccactggtaccattggtgctgtgact
tctactgctactatagccaccacaacaaccagtgctcccccagtgatgacttatgctcag
ctggagagtctgattaataaatggagcctagaactggaggaccaggagaaacattttctt
catcaggctacacaggtcaatgcctgggatcggacactgattgagaatggagagaagatt
acttcattacacagagaagtggagaaagtgaagctggatcagaagaggttggatcaggaa
cttgatttcatcctgtcacaacagaaggagctggaagatttgctgattcctctggaggag
tctgtaaaggaacagagtgggactatctacttgcagcacgcagatgaggagcgggagcga
acctataaattggctgaaaacatagatgcccagttgaagcgtatggcacaggatctcaaa
gacatcattgagcacctgaacacatctgggggccctgccgataccagcgacccactccag
cagatctgtaaaattttgaatgcacacatggattcattgcagtggattgaccagaactcg
gccctgctgcagaggaaggtagaggaggtgacgaaggtttgtgagagccgccgaaaggaa
caggaacgcagttttcggatcacattcgattga
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