Emys orbicularis (European pond turtle): 135883533
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Entry
135883533 CDS
T11511
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob03013
Nucleocytoplasmic transport
eob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135883533 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
135883533 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eob03019
]
135883533 (THOC2)
03041 Spliceosome [BR:
eob03041
]
135883533 (THOC2)
Messenger RNA biogenesis [BR:
eob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
135883533 (THOC2)
Spliceosome [BR:
eob03041
]
Complex C
Other components
EJC/TREX
135883533 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
135883533 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
135883533
NCBI-ProteinID:
XP_065266790
LinkDB
All DBs
Position
9:complement(14714382..14829074)
Genome browser
AA seq
1611 aa
AA seq
DB search
MAAAGALPAEWIKNWEKSGKSEFLQLCRTLSENKSHENVTFRDIQQALYELANHVVKGNL
KHDQASNVLSDVIEFRDDMSSILADVFCILDIETSCLEEKSKRDHFTQLVLACLYLVSDT
VLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQ
DLSGNITSDLILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDEFFVPLIESYMYMCEP
QTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQHNLIDLEDLYVHLLPVDNAILEEHKR
EIVEAKQIVRKLTMVVLSSEKTEEKEKEKDKEEEKTEKPPDNQKLGLLEALLKVGDWQHA
QSIMDQMPPFYATSHKPIAIALCQLVHVTIEPLYRRVGVPKGAKGSPISNLQNKRAPKQA
ESFEDLRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEVGTSKKLNSEDRMVKFQSD
GNKQEDKDKMEILFSCLLNITDQVLLPSLTLMDCNACMSEELWGMFKTFPYQYRYRLYGQ
WKNETYNSHPLLVKVKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQ
IQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFC
GAVFRKYPIELAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGG
EQLKAEGGYFGQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLV
GKLYDQCHDTLVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHI
SSKYDELKKAEKGNKQQHKVHKYITSCELVMAPVHDAVISLHLPKVWDDISPQFYATFWS
LTMYDLAVPHNSYDREVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQL
EHVQRVLQRLKLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQ
KTPNFSTLLCYDRVFSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRNIYEKECGN
YPGFLTILRATGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIV
LTKILPWYPKVLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPYMVPENEF
HHKDPPARNAVAATVQNGPGGAGLPASLTINAAKLEESTAEETDKLKEKTQGAVKVINKA
ANATPKVTTSNGNSASNSKIIKEKDDKEKSGKEKDKEKKEKTPAAIPEAKALGKDGKDKP
KEERANKDDKSRETKEKTPKSDKEKEKAKKEEKTPKDEKSKTVVTNAESKFAAEKEREKE
PSRERDVAKDMKSKENIKGGEKLSVAGSLKSPVPRSETSESEREQKRRKVDTHSSPSHSS
TVKDSLSELKDSSAKHYINHTTPALSKSKEREVDKKDLDKSRERSREREKKDEKDRKDRK
RDHSNSDREVPQDSTKRRKEENGTTGSSKHSKSESPSDSPRSNEKEKEKNKSKSSGKEKG
DSIKTEKMEKSSSGSKKESRHDKEKTEKKEKRDSAGGKEEKKHHKSSDKHR
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgggggcgctccctgccgagtggataaagaactgggagaaatcgggcaag
agcgagtttttgcaattatgccgcacgctcagtgaaaataaaagccatgaaaatgtgact
ttcagagatatccagcaggctctgtatgagcttgcaaatcacgttgtcaagggaaaccta
aagcacgatcaagcttctaatgttctcagtgatgttatagaatttcgggatgacatgtcc
tccatccttgctgatgtattctgcatattggatatcgaaacaagttgtttagaagaaaaa
agcaagagagatcattttacacaactggtgttagcctgtttgtaccttgtttcagacacc
gtcctaaaggagcgtctggatccggaaacactggaatcattagggctcatcaagcagtct
cagcagtttaatcagaaatctgttaaaatcaagacaaaacttttttataaacaacagaaa
tttaacttattaagagaagagaatgaaggttatgcaaagctgattgctgaactggggcaa
gatttatctggcaatatcactagtgatttaatcctagaaaatatcaaatctttaatagga
tgttttaacttggatcccaacagagttttggatattatcttagaagtctatgaatgtagg
ccggaatatgatgaattctttgtacctttgatagaatcatacatgtatatgtgtgaacct
caaactctgtgtcatatccttgggttcaaattcaaattctatcaggaaccaaatggtgaa
acaccttcctctttatacagagttgctgcagtacttttgcaacataatcttatagatttg
gaagatctttatgtacatcttcttccagtagataatgccattcttgaagaacacaaacga
gagattgtagaggcaaaacaaattgttaggaaacttacaatggtggttttgtcctctgaa
aagactgaagagaaagagaaggaaaaggacaaggaagaggaaaaaactgaaaagccacct
gacaaccagaaacttggtttgttggaagctttgttaaaagttggtgattggcagcatgca
caaagtattatggatcaaatgcctccattttatgccacttcacacaagcctattgccatt
gccctttgccagcttgtacatgtgaccattgagcctttgtaccgcagagttggagtacct
aaaggggctaaagggtcaccaatttccaatttgcaaaataagagagccccaaaacaagca
gaaagttttgaagatttgaggaaggaagtgttcaacatgctttgttatcttggtcctcat
ctctcccatgatcccattttatttgcaaaagtggttcgcttaggaaaagcatttatgaaa
gaggttggaacttcgaagaaactgaacagtgaggacagaatggttaagtttcaatctgat
ggaaataaacaagaggataaagataaaatggagattttgtttagctgtttgttaaatatt
accgaccaagttttgctcccatctcttactttaatggactgcaatgcgtgcatgtccgag
gaactctggggaatgttcaaaacttttccataccagtatcgctatcgtctctatggacaa
tggaagaatgaaacatacaacagtcacccacttctagtgaaagttaaagctcaaactatc
gacagagccaaatatatcatgaagcgtctaactaaggaaaatgtgaagccttctggaaga
caaattgggaagctaagccatagcaatccaacaattttatttgattatattttgtcacaa
atacaaaaatatgataatttaattacaccagttgttgattcattgaaatacctcacttca
ctgaactacgacgtcttggcatactgcatcattgaagctctggcaaatcccgagaaggag
agaatgaaacatgatgacactacaatttctagctggctgcagagtctagctagtttttgt
ggtgcagttttccgaaaatatccgattgaacttgctggtctactgcagtatgtagcaaac
caactaaaggctggaaaaagctttgacttgctcattttaaaagaggtggtacaaaaaatg
gctggaatagaaataacagaagagatgacaatggagcagctagaagccatgactggtgga
gaacagctaaaagctgagggtggatattttggccagatcagaaacactaaaaaatcttct
cagagattaaaagatgcattgcttgaccatgatctggcccttccactgtgcctgcttatg
gctcaacagcgaaatggtgtgatctttcaggagggaggggagaaacatttgaagctagtg
gggaagctgtacgatcagtgccatgatactctggtacagtttggtggatttttagcatcc
aatctaagcacagaggattacattaagcgagtgccttctattgacgttctctgtaatgag
tttcacacaccccatgatgctgcatttttcctctccaggcctatgtatgcacatcatatt
tcatcaaaatatgatgaacttaaaaaagctgagaagggaaacaaacagcagcacaaggtt
cacaagtacatcacgtcatgcgagctagtgatggctcctgttcatgatgctgtgatctcc
ttgcaccttcctaaagtttgggatgacatcagtcctcagttctatgctacattttggtct
ttgacaatgtatgaccttgctgttccacataatagctatgacagagaagtcaataaactt
aaagtccagatgaaagctatagatgacaatcaggaaatgcctccaaataaaaagaaaaaa
gaaaaagaacgttgtacggcccttcaggacaagcttcttgaagaggagaaaaagcagttg
gagcatgtgcagagggttctacagagactgaaactggaaaaggataactggcttctggca
aaatcaaccaaaaatgagactatcacaaaatttctacagttgtgtatatttcctcgctgc
attttttctgcaatcgatgctgtttactgtgctcactttgtagaactggtgcatcaacag
aaaacacccaatttttccacacttctctgttatgatagagttttctcagatataatctat
acagtagcaagttgcactgaaaatgaagctagtagatacggcaggtttctgtgctgtatg
ctagagactgttactaggtggcacagtgatagaaacatatatgaaaaggaatgtggcaac
tatccaggcttccttaccatattacgggcaactggatttgatggtgggaacaaagctgat
cagttagattatgagaactttcgacatgtggtacacaaatggcactataaattaactaag
gcttctgtacactgccttgaaacaggcgaatatacacatatcagaaatatcctgattgtg
ctgaccaaaatccttccatggtatccaaaagttctgaacctgggtcaggccttggaaaga
agagtacataagatctgtcaggaagagaaagagaagagacctgatctatatgcgttagct
atgggctattctgggcaattgaaaagtagaaagccttacatggtaccggaaaatgaattc
caccacaaagacccacctgccaggaatgctgtagctgcaacagtgcaaaatggaccaggt
ggtgctgggctgcctgcatcactcacaataaatgcagctaaactggaggaaagcactgct
gaggagactgacaaactaaaggagaaaactcagggtgctgtgaaagttattaataaagct
gccaatgcaacaccaaaagtgacgacaagcaatggaaacagtgcttctaacagcaaaatt
attaaagaaaaagatgataaagaaaaaagtgggaaggaaaaagataaagaaaaaaaagaa
aagactccggctgccattccagaggccaaggcacttggaaaggatggaaaagataaacca
aaggaagaacgggcaaacaaagatgataaatcaagagagaccaaggaaaaaacaccaaaa
tctgacaaagagaaggaaaaagccaagaaagaagaaaaaacgccaaaagatgaaaaatcc
aagacagttgttaccaacgctgagtcaaagttcgctgcagaaaaggagagagaaaaggag
ccatccagagaaagagatgtagcgaaggatatgaaatccaaggaaaatattaaaggagga
gaaaaattgtcagtagctgggtccttgaagtcacctgttccccgatcagaaacatcagag
tctgaaagggaacaaaaacgtcgcaaagttgatacccattcttctccatcacattcctca
acagtaaaggacagcctcagcgaactcaaggactcttcagcaaagcactacattaaccac
actactcctgcactgtccaagagtaaggagagagaagtggacaagaaagatttggacaag
tccagggaaagatccagagagagagagaagaaagatgaaaaggataggaaagatcgaaaa
agggatcattcaaatagtgaccgggaggtgccacaggactcaaccaaaaggcgtaaagag
gaaaatggaacaactggttcttcaaaacatagtaaaagtgaaagtccatctgattctcct
cgttcaaatgagaaggaaaaggagaagaacaaatcaaaatcttcaggcaaagaaaaaggt
gattcaatcaaaactgaaaagatggagaaaagttcctctggtagcaaaaaggagtctaga
catgataaagaaaaaacagaaaaaaaggaaaaacgggacagtgctggagggaaagaagaa
aagaaacatcataaatcttcagacaagcacagataa
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integrated database retrieval system
