Emys orbicularis (European pond turtle): 135883635
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Entry
135883635 CDS
T11511
Symbol
NCBP2
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob03013
Nucleocytoplasmic transport
eob03015
mRNA surveillance pathway
eob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135883635 (NCBP2)
09122 Translation
03013 Nucleocytoplasmic transport
135883635 (NCBP2)
03015 mRNA surveillance pathway
135883635 (NCBP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eob03019
]
135883635 (NCBP2)
03041 Spliceosome [BR:
eob03041
]
135883635 (NCBP2)
Messenger RNA biogenesis [BR:
eob03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
135883635 (NCBP2)
Spliceosome [BR:
eob03041
]
Common components
Common spliceosomal components
Cap binding complex
135883635 (NCBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
135883635
NCBI-ProteinID:
XP_065266930
LinkDB
All DBs
Position
9:107838403..107845868
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AA seq
157 aa
AA seq
DB search
MCSVAMLSVLRSDSYVELSQYRDQHFRGNRYDQERLLKKSCTLYVGNLSFYTTEEQIYEL
FGKSGDIKKIIMGLDKVKKTACGFCFVEYYSRGDAENAMRYINGTRLDDRIIRTDWDAGF
KEGRQYGRGRSGGQVRDEYRQDYDAGRGGYGKVVQPQ
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgtgctcggtagcgatgctgagcgtcctgcgcagcgactcctatgtggagctgagtcag
taccgggaccagcactttcggggtaacagatatgaccaggagcgactgctgaaaaagagc
tgcaccctgtatgtggggaatctctccttctatacaacagaagagcagatctatgaactg
tttggtaaaagtggggatataaagaaaatcattatgggcctggacaaagtgaagaaaact
gcttgtggtttctgttttgttgaatactactcaagaggagatgctgaaaatgcaatgaga
tacatcaatgggacacggcttgatgataggatcatcaggacagattgggatgcaggtttt
aaagagggcagacagtatggtcgtggaaggtcagggggtcaggtccgagatgaatatcgg
caggactatgatgctgggagaggaggttatggcaaagttgttcaaccccagtga
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integrated database retrieval system
