Emys orbicularis (European pond turtle): 135883693
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Entry
135883693 CDS
T11511
Symbol
PCDH19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K28837
protocadherin-19, delta 2
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
135883693 (PCDH19)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
eob04515
]
135883693 (PCDH19)
Cell adhesion molecules [BR:
eob04515
]
Cadherins
Protocadherins
135883693 (PCDH19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Ig_CLSTN
Ig_Cad99C_N
Cadherin_FAT4_N
PepSY
Motif
Other DBs
NCBI-GeneID:
135883693
NCBI-ProteinID:
XP_065266999
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All DBs
Position
9:complement(38946520..39064080)
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AA seq
1094 aa
AA seq
DB search
MDILPVLLALLWTGAGALINLKYSVEEEQRAGTVIANIGKDAREAGFVLDPRQPAAFRVV
SNSAPHLVDINPGSGLLVTKQKIDRDLLCRQSPKCVISLEVMSGSMEICVIKLEIKDLND
NAPSFPTDQIELEISETASPGTRVPLESAYDPDSGSFGVQSYELTPNDLFGLETKTRGDG
SRFAELVVERSLDRETQSHYSYLLTALDGGDPPNFGTVELSIRVIDSNDNNPLFEEPAYA
VSVPENAPPGTPLLRLNASDPDEGTNGQVLYSFHSYVSERARQLFHLDPQSGLLSVSGAV
DYEEGHSYELDVQAKDLGPNSIPAHCKVTVSVQDANDNPPLINLLSVNSELVEVSESAPP
GYVIALVRVSDRDSGANGRVQCKLLGSVPFRLQEYESFSTILVDGRLDREQRDQYNLTIQ
ARDNGVPSLQATKSFTVKITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDPDLGL
NGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGNPSLQ
SNATIRVIVLDVNDNTPVITAPPLVNGTAEVYIPRNAGVGYLVTVIKADDYDEGENGRLS
YEMADGDRGFFEIDQFNGEIRTTRAFGENAKTTYELIVVAHDHGKTSLSASALILIYLSP
ALDAQESIGSVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRIAEYSYGH
QKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSEST
FLNVENQNTRNTGSNHVYHHTFTGQSPQQPDLIINGMPLPETENYSFDSNYVNSRAHLIK
SSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGLYCDTAVNDVLNTSVTSMGSQMPEQDQ
TEGFHCREECRILGHSDRCWMPRNSVPSRAKSPEHGRNVMALSIEATTVDTEPYEDCSTK
RTFATFGKDGSEPLADERIVNLKGKRTVDLPICSPKVNGAVREAGNGCEAVSPITSPLHL
KSPLSSKPSVSYNIMHCPVNRDLEQFVNNGPSRPTEAEPRGADSENIMHEINPLLQECRE
KDSPGVKRLKDIVL
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atggatattctccccgtcctgctcgccttgctgtggaccggggcaggagccctgatcaac
ctgaagtactcggtggaggaggagcagcgcgccggcacggtgatcgcgaacatcggcaag
gacgcccgggaggctggcttcgtgctggacccccgccagcccgccgccttccgggtggtc
tccaactcggccccgcacctggtggacatcaacccgggctcgggcttgctggtgaccaag
cagaagatcgaccgggacttgctgtgccgccagagccccaagtgcgtgatctcgctggag
gtgatgtccggctccatggagatctgcgtgatcaaactggagatcaaggacctgaacgac
aacgcgcccagcttccccaccgaccagatcgagctggagatctcggagacggccagcccg
ggcacgcgggtgccgctggagagcgcctacgacccggactcgggcagcttcggcgtgcag
agctacgagctcacccccaacgacctcttcgggctggagaccaagacgcgcggcgacggc
tcccgcttcgccgagctggtggtggagcgcagcctggaccgcgagacgcagtcccactac
agctacctgctcacggcgctggacggcggcgacccgcccaacttcggcacggtggagctc
agcatccgggtcattgactccaacgacaacaacccgctcttcgaggagccggcctacgcc
gtcagcgtgcccgagaacgcgccgcccggcacgcccctgctccgcctcaacgcctcagac
cccgacgagggcaccaacgggcaggtgctctactccttccacagctacgtgtccgagcgg
gcccgccagctcttccaccttgacccgcagagcggcctgctcagcgtcagcggcgccgtg
gactacgaggagggccacagctacgagctggacgtgcaggccaaggacctggggcccaac
tccatcccggcccactgcaaggtgacggtcagcgtgcaggatgccaatgacaacccaccc
ctcatcaacctgctctcggtcaacagcgaactggtggaggtgagcgagagcgcgccgccc
ggctatgtcatcgccctggtgcgggtctctgaccgcgactccggggccaatgggcgggtg
cagtgcaagctgctgggcagtgtgcccttccgcctgcaggaatacgagagcttctccacc
atcctggtggacgggcggctggaccgggagcagagggaccagtacaacctcaccatccag
gccagggacaacggggtgccctccctgcaggccaccaagtccttcaccgtcaagatcacc
gatgagaacgacaaccacccccacttctccaagccctactaccaggtcatcgtgcaggag
aacaacacccccggggcctacctcctgtccgtctccgccagggaccctgacctgggcctc
aatggcagcgtttcctatcagatcgtgccctcccaagtccgggatatgcctgtcttcacc
tacgtctccatcaaccccaactctggggacatctatgccttgaggtccttcaatcacgag
cagaccaaggccttcgagttcaaggtcttggccaaagacgggggcaacccatccctgcag
agcaatgccaccatcagagtgatcgtcctggatgtcaatgacaacacccctgtgataact
gccccacctctggtcaatgggactgcagaagtgtacatccctaggaatgccggggttggc
tacttagtgacagtgatcaaggcagatgactatgatgagggggagaatggaagactgtcc
tatgaaatggcagatggagatagagggttttttgaaatagatcagttcaatggagagata
aggaccaccagagcattcggggagaatgcaaagactacttatgagctgattgtggtggcg
catgaccatggaaaaacatcgctctcagcttctgccttgattttgatatacctatctcca
gctctcgatgcccaggaatccataggatctgttaacttgtcactgattttcattattgcc
ctgggttctattgccgccattctttttgtcaccatgatctttgttgcagtcaagtgtaaa
agggataacaaggaaataaggacctacaactgcagaattgcagagtactcctatgggcat
caaaagaaatcaagcaagaagaaaaaaatcagcaagaatgatatccggctggtaccacgg
gatgtagaggagacagataaaatgaatgtggtgagctgctcctcccttacttcatctctc
aactatttcgactatcatcagcagaccttgccactgggctgccgcagatctgaaagtacc
ttcctcaatgtggagaatcagaacactaggaacacaggctccaaccatgtttatcaccac
accttcaccgggcagagtccccagcaaccagatctgatcatcaatggaatgccattgcca
gagactgaaaactactcttttgattccaactatgtgaacagcagagcccatttaataaag
agcagttcaactttcaaggacttagaggggaatagtctcaaggatagtgggcatgaggag
agtgaccagactgacagtgaacatgatgtccaacggggcctgtactgtgatactgccgtc
aacgatgtgctgaacaccagtgttacttccatggggtctcagatgcctgaacaagatcaa
actgaaggatttcattgtagggaagagtgtcgaatccttggtcactcagatagatgctgg
atgccccggaactctgtccccagtcgtgcaaaatcccccgagcatggaaggaatgtcatg
gcactctctatagaagctaccactgtggatacagagccttatgaagactgtagtacaaaa
agaacttttgcaacgtttggcaaagatgggagtgaacccctcgccgacgagcgtatcgtc
aacctgaaaggcaaaagaacagtggatctgcccatctgcagcccaaaggtaaatggcgca
gtccgtgaagcggggaatggctgcgaagctgtgagccccatcacgtcaccccttcatttg
aagagccccctgtctagcaaaccttcagtatcatacaacataatgcactgcccggtaaat
cgcgacctggagcaatttgtaaacaatggcccttctcggcccaccgaagcagagcctaga
ggggcagacagtgaaaatataatgcatgaaattaacccacttctgcaagaatgtagagaa
aaagactcaccaggagtgaagagactaaaagacatagtactctaa
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