Emys orbicularis (European pond turtle): 135883766
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Entry
135883766 CDS
T11511
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob03030
DNA replication
eob03410
Base excision repair
eob03420
Nucleotide excision repair
eob03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
135883766 (RFC4)
03410 Base excision repair
135883766 (RFC4)
03420 Nucleotide excision repair
135883766 (RFC4)
03430 Mismatch repair
135883766 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eob03032
]
135883766 (RFC4)
03036 Chromosome and associated proteins [BR:
eob03036
]
135883766 (RFC4)
03400 DNA repair and recombination proteins [BR:
eob03400
]
135883766 (RFC4)
DNA replication proteins [BR:
eob03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
135883766 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
135883766 (RFC4)
Chromosome and associated proteins [BR:
eob03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
135883766 (RFC4)
DNA repair and recombination proteins [BR:
eob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
135883766 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
135883766 (RFC4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_assoc_2
AAA_lid_RFC1
AAA_22
AAA_11
AAA_30
AAA_16
DUF815
AAA_28
AAA_23
SLFN-g3_helicase
Mg_chelatase
AAA_14
RuvB_N
AAA_5
AAA_19
AAA_24
AAA_3
ResIII
bpMoxR
AAA_7
Viral_helicase1
DNAX_ATPase_lid
nSTAND3
TIP49_C
RNA_helicase
ABC_tran
Motif
Other DBs
NCBI-GeneID:
135883766
NCBI-ProteinID:
XP_065267080
LinkDB
All DBs
Position
9:98906500..98926058
Genome browser
AA seq
365 aa
AA seq
DB search
MQAFLKGPSSISTKAPASKERGTAAAAGASGEGKRLKPIPWVEKYRPKCVDEVAFQEEVV
AVLKKSLEGADLPNLLFYGPPGTGKTSTILALARELYGPELFRQRVLELNASDERGIQVI
REKVKTFAQLTVSGSRSDGKVCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLI
CNYISRIIEPLTSRCSKFRFKPLTDKIQQQRLWAVSEKENVKVSNEAMSCLVQVSEGDLR
KAITFLQSATRLTGGKEITEKVVTEIAGVVPKETIDGLLSACQSGSFEKLETVVKNLINE
GYAAAQLVNQLHDDIVEREDLTDQQKSIIAEKLAEVDKCLTDGADEYLQLISLCAVVMQQ
LTQNG
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgtttctgaaaggcccgtcctccatcagcaccaaagcgccagcctccaaggag
cgagggacggctgccgccgcaggagctagcggcgagggcaagagactcaaacccatccct
tgggtggagaaatatcgtccgaagtgtgtggatgaagttgcattccaagaggaagttgtt
gctgtactgaaaaaatccttagagggagctgatcttcccaatctcttgttttatggccca
cctggaacaggaaagacttctactattttggcattagccagagaactctatggacccgaa
ttgttccgacagagagttcttgagttaaatgcttctgatgaacgtggaatacaagtgatt
cgagagaaagtgaagacatttgctcagctaacggtgtctggaagtcgttcagatggtaag
gtttgtcctccttttaagattgtgatcctggatgaagcagactccatgacttcagccgct
caggcagccttgagacgcactatggagaaagaatctaaaactacacgcttctgccttatt
tgtaattacatcagcagaataattgaacccttaacatctcgatgctccaaattccgtttc
aagcccctgactgataaaatccaacagcagagactatgggctgtttctgaaaaggaaaat
gtgaaagttagcaatgaggcaatgtcttgtcttgttcaagtgtcagaaggagacttaaga
aaagcaatcacatttcttcaaagtgctactcgattaacaggtgggaaagagatcacagag
aaggttgtcaccgaaattgcaggggttgtccctaaggaaacaattgatggactgctatct
gcctgtcaaagtggctcttttgaaaaactggaaactgtagttaagaatctgataaatgaa
gggtatgctgctgctcagcttgtaaaccagcttcatgatgatattgttgagagagaggat
ctcactgaccagcagaaatctattattgcagagaaacttgctgaggtagacaaatgcttg
acagatggtgcagatgagtacttgcaattgatcagtctctgtgccgttgtgatgcagcag
ctaactcagaatggctag
DBGET
integrated database retrieval system
