Emys orbicularis (European pond turtle): 135884363
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Entry
135884363 CDS
T11511
Symbol
NEO1
Name
(RefSeq) neogenin
KO
K06766
neogenin
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob04350
TGF-beta signaling pathway
eob04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
135884363 (NEO1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
135884363 (NEO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
eob04515
]
135884363 (NEO1)
Cell adhesion molecules [BR:
eob04515
]
Immunoglobulin superfamily
DCC/UNC5 family
135884363 (NEO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
Pur_ac_phosph_N
ig
Fn3_VIN3
FN3_DSCAM-DSCAML_C
V-set
Interfer-bind
Ig_Rha78A_N
C2-set_2
TMEM154
TM_ErbB1
GBS104-like_Ig
EphA2_TM
Neur_chan_memb
FAM176
Motif
Other DBs
NCBI-GeneID:
135884363
NCBI-ProteinID:
XP_065267753
LinkDB
All DBs
Position
10:complement(44238376..44766182)
Genome browser
AA seq
1471 aa
AA seq
DB search
MAARGARRLLGSLWIALLLGQPDPAGAARSSSQSPAGSTVRTFTPFYFLVEPVDTLSVRG
AFIILNCSAYCEPSPKIEWKKDGTFLNLVSDDRRQLLPDGSLLINSVVHSKHNKPDEGYY
QCVATVESLGTIVSRTAKLTVAGLPRFTSQPESTSVYRGNSVILNCEVNADLVPFVRWEQ
DRQPFFLDDRVFTLPSGALIISNVTDGDGGLYRCVIESGGSPRYSDEAELKVLPDPEVPL
NLVFLRQPSPLTKVTGQSAVFPCVTAGFPTPVVRWMKNEEELTTEGSGKFLLLAGGSLEI
SDVTEDDAGTYACIVDNGNETIEAQAELAVQAPPEFLKQPANIYAHESMDIVFECEVTGK
PTPTVKWIKNGDMVIPSDYFKIVKEHNLQVLGLVKSDEGFYQCIAENDVGNAQAGAQLII
LEHDVAIPTLPPTSLTSATTDHLAPATTGPLPSAPRDVVASLVSTRFIKLTWRTPASDPH
GDNLTYMVFYTKEDINRERVENTSRPGEMQVTIQNLMPETVYVFRVVAQNKHGPGESSVP
LKVATQPEVQLPGPAPNIRAYANSPISITVTWDTPLSGNGEIQNYKLFYMEKGTDNEQDV
DVGGHSYTISGLKKYTEYSFRVVAYNKHGPGVSTQDVVVQTLSDVPSAAPQNLSLEVRNS
KSIMIHWQPPPAGTHNGQITGYKIRYRKASRKSEVSESIGGTQLFQLIEGLERGTEYSFR
VAALTSNGTGPATDWISAETFESDLDETRVPEVPSSLHVRPLVTSIVVSWTPPENQNIVV
RGYAIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTR
PHTDTSEVDLFVINAPYTPVPDPSPMMPPVGVQASILSHDTIRITWADNSLPKNQKITDA
RYYTVRWKTNIPANTKYKTANTTTLSYLVTSLKPNTLYEFSVMVTKGRRSSTWSMTAHGT
TFELVPTSPPKDVTVVSKEGKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIE
PVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPKAESSDKMPNDQALGS
AGKGSRPLDIGPDYKPPMSGSNSPHGSPTSPLDSNMLLVIIVSVGVITIVIVVIVAVFCT
RRTTSHQKKKRAACKSVNGSHKYKGNSKDVKPPDLWIHHERLELKPIDKSPDPNPIMTDT
PIPRNSQDITPVDNSMDSNIHQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDSQPPQP
VISAHPIHSLDNPHHHFHSGSLASPTRSYLHHQVNPWPIGTSMSHSDRANSTESVRNTPS
TDTMPASSSQTCCADHQEPESATASYLANAQEEDSGQSLPTAHVRPSHPLKSFAVPAVPP
TGSTYDPALPSTPLLTQQASNHPVHSVKTASIGTLGRTRPPMPVVVPSAPDVQETTRMLE
DSESNYEPDELTKEMAHLEGLMKDLNAITTA
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcggggagccaggcggctcctcggctccctgtggatcgccctgctcctaggg
cagccggacccggccggtgccgccaggagcagctcgcagagccccgcagggtccaccgtg
agaaccttcactccgttttattttctggtggagccagtggacacgttatcagttcgaggg
gcttttatcatactgaactgttcagcttactgtgagccttctccaaaaattgaatggaag
aaagatgggactttcctaaatttggtgtcagatgaccggcgccagctgctaccagatgga
tctttgttaataaacagtgtggtgcattccaaacacaataaacctgacgaaggatattat
caatgtgtggcaaccgtggaaagccttgggaccattgtaagcagaacagcaaagcttaca
gtagcaggacttccaaggttcactagccagccagaatcaacatctgtctatagaggaaac
agcgtaattctgaactgcgaggttaatgctgatctggtaccatttgtgaggtgggagcag
gatcgtcaaccattctttttggatgaccgtgtattcacattaccaagtggagctctaatc
attagcaatgttacagatggggatggcggactctatcgctgtgtcattgaaagtggtggg
tcgcccagatacagtgatgaagcagagctaaaagttcttccagatccagaggttccatta
aacctggtgtttctgaggcaaccttctccacttaccaaagttactgggcaaagtgcagtt
ttcccatgtgtcactgcaggatttccaactccagttgtcaggtggatgaaaaacgaagaa
gaacttaccacagaaggctctggaaaatttctgttactggcgggagggagcctggagatc
agtgatgtcacagaagatgatgctgggacatatgcctgcattgtggataatgggaatgag
acaattgaagctcaagcagaacttgcagttcaagctccacctgaatttctgaagcagcct
gctaatatttatgctcatgaatctatggatattgtctttgagtgtgaagtgactgggaaa
ccaactccaacagtgaaatggatcaagaatggagacatggtgatccctagtgactacttc
aaaattgtaaaggagcataacctgcaggttttgggtcttgtgaaatcagatgaaggattc
tatcagtgcattgcagaaaatgatgttggaaatgcacaggctggagcccagctgataata
cttgaacatgatgttgccatcccaacattacctcccacttcactgaccagtgccactact
gaccatctagcaccagctacaactggaccattgccttcggctcctcgggatgtcgtggcc
tccctcgtctctactcgcttcatcaaactcacatggcggacaccagcatcagatcctcat
ggagacaacctcacctatatggtattctacaccaaggaagatataaacagggaacgtgtt
gaaaatacaagtcgtcctggagagatgcaagtgacaatccaaaacctgatgccagagacc
gtgtatgttttcagagttgtggctcaaaacaaacatggccctggagagagctcagtacca
ctgaaggtggcgactcagcctgaagttcaacttcctggtccagcgccgaacattcgagca
tatgctaattcacccatttcaatcactgtcacatgggacacaccgttgtcgggcaatggt
gaaatccagaactacaagctcttttacatggaaaaggggacagataatgaacaggatgtt
gatgttggaggtcactcctacaccattagtggattaaagaaatataccgagtacagcttc
cgagtggtagcctacaataaacacggtcctggagtctctacccaagatgttgttgtgcag
actctgtcagatgtccccagtgctgcaccacagaatctgtcgctggaagtgcggaattcc
aagagcatcatgatacattggcaaccccctcctgcaggaacacacaatggtcaaatcacc
ggctacaaaattcgctaccgtaaagcatctcgtaagagtgaggtatccgagagcattggt
gggacacaacttttccagctaatcgaaggtcttgagcgaggtacagaatacagtttccgt
gtggctgccttaacaagcaatggtacaggaccagctactgattggatatcagcagaaact
tttgagagtgatctagatgaaactcgtgttccagaagttccaagctccctacatgttcgc
ccacttgttacaagtattgtagtgagctggactcctcctgaaaaccagaacattgtggta
agaggatacgctatagggtatggcattggcagtcctcatgcacagactatcaaagtggac
tacaaacaacgctattacaccattgagaacttggatccaagttcccactatgtcataact
ctgaaagcatttaacaatgttggtgaaggaatcccactctatgagagtgcagtgaccagg
cctcatacagacacttccgaagttgatttatttgttattaatgctccatacactccagtg
ccagatccctcccccatgatgccaccggtgggagttcaggcttccattctgagccatgac
accataaggatcacttgggcagacaactctctgccgaaaaatcagaagatcacagatgct
cgctactacacggtccgctggaaaacaaacattcctgcaaacacgaagtacaagactgca
aacacaaccaccttgagctatttagtgaccagtttaaaaccaaacaccttgtatgaattc
tctgtgatggtgactaaaggtcgaagatcaagtacttggagtatgacagctcatggaact
acctttgaattagttcctacgtctccaccaaaagatgtgactgtggtgagcaaagaggga
aaacctaggacaataattgtaaactggcagcctccgtctgaagccaatggcaaaattaca
ggatacatcatttactacagcacagatgtgaacgctgagatacatgattgggtcattgag
cctgtggtgggaaacagattgacacaccagatccaagagttaacccttgatacgccatat
tatttcaaaatccaggcccgcaactccaagggcatggggcctatgtcggaggcagtacag
ttcagaacacccaaagctgaatcctcagataaaatgcctaatgatcaagcattagggtct
gcaggaaaaggaagtcggccattggatataggacctgactacaaaccacccatgagtggc
agtaacagtcctcatggaagccccacatcccccctggatagcaacatgcttctagtcata
atagtatctgttggagtgatcaccattgtgatagtggtgattgttgctgtcttctgcact
cgtcgcaccacctctcaccagaaaaagaaacgagctgcctgcaaatcagtgaatgggtcc
cataaatacaaaggaaattccaaggatgtcaaaccccctgacctttggatccatcatgag
agactggagctgaaacccattgataaatctccagaccctaacccaatcatgacagacacc
ccaatccctcgcaactcccaggacatcacgccagttgacaattccatggatagcaatatc
catcaaaggcgcaactcatacagggggcatgagtcagaggacagcatgtccacattggca
ggaagaagagggatgaggccaaaaatgatgatgccatttgattctcagccccctcagcct
gtgattagcgctcatcccatccattcactcgataaccctcaccatcatttccactccggc
agcctcgcttctccaactcgcagctatctccatcatcaggtcaacccttggccgattggc
acatccatgtcccattcagacagggccaattccacagaatctgttcgaaatacaccgagc
acagacaccatgccggcttcctcatctcagacatgttgtgctgaccatcaagagccagaa
agtgccacagcatcttatctggccaacgcgcaggaggaggattcaggtcaaagtctccct
actgcccacgtccgtccctctcaccctctgaagagctttgcagtgccagcagttccaccc
acaggttccacatatgacccagcattgccaagcacaccattattaacgcagcaagcttct
aaccatccagttcactcggtgaagactgcgtcgatcgggactttagggagaactcgacca
cctatgccagtggtagtgcccagcgcccccgatgtgcaggagaccaccaggatgcttgag
gactcagaaagtaactatgaaccagatgagctgaccaaagagatggcccacctggaagga
ctaatgaaggaccttaatgccatcactacagcatga
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