Emys orbicularis (European pond turtle): 135884927
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Entry
135884927 CDS
T11511
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob04010
MAPK signaling pathway
eob04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135884927 (CACNA1H)
04020 Calcium signaling pathway
135884927 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
eob04040
]
135884927 (CACNA1H)
Ion channels [BR:
eob04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
135884927 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
Motif
Other DBs
NCBI-GeneID:
135884927
NCBI-ProteinID:
XP_065268587
LinkDB
All DBs
Position
10:6031930..6489747
Genome browser
AA seq
2398 aa
AA seq
DB search
MLVILLNCVTLGMFQPCEDVDCKSERCTILEAFDHFIFAFFAVEMVLKMVALGIFGQKCY
LGDTWNRLDFFIVMAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFVDSNFAMTYNFTLPQPYYQPEEGEE
NPFICSSHRDNGMQKCSNIPNRKEYRVECTLSMDSYNQNLYNPDFSNRNACINWNQYYNV
CKAGDVNPHNGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVG
SFFMINLCLVVIATQFSETKQRENQLMKEQRARYLSNDSTIASFSEPGSCYDELLKYICH
IFRKVKRRTLRLYNNWQSKRRKKVNPNSAPNGQSRRSKKRITSIHHLIHHHHHHHHHYHI
SNGSPRGLRSNPEICDLELKVMKSGSQLMLPSPSPNLHSPPPHLDSESVHSIYHADCHVE
GPQVKCKSSNATASIKLTAGLTTNHGNMNYPTILPSPASKASSAPVPKGKKSGSSPMAMV
NSPVSLNAAPFEKLRQLMGEHGLCRTSSRLSGLNVPCPLPSPQPSILTCELQNCPYCANI
LEDPEFEFSESDSYDSDNNGVYEFTQDLRHGDQRDQIQQQRNKKRKKKKPKERNKVARLW
VAFGNKLKRIVESKYFNRGIMIAILINTLSMGIEYHEQPDELTNALEISNIVFTSMFALE
MVLKLLAFGIFGYIKNPYNIFDGIIVIISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFMP
ALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTDTGDTVPDRKNFDS
LLWAIVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQ
AEGDANKSDTDEDKTSANFDEDIEKLKDLCATEMKMYSLAITPNGHVEGRASIPPPIIMR
TAATPMPTPKCSPHMDSVHTFVDSRRGSNASVDPLSYDQKSLSSLRSSPCANWGPNSNWG
SRRSSWNSLGRAPSLKKKNQSGERESLLSGEGKGSTDDDSDDAKSSTVSRATLHRRAESL
DYRSSLDLPELLQLPTMRHSLSINPIAVLPTEYQDCNGKMVHVPSEFFLRIDSHKDDLLD
YDDDMDDSYCYRIRKALEPYKPEWCKNHEDWSLYLFSPQNRIRAMCQKVIAHKMFDHVVL
VFIFLNCITIALERPDIDPHSTERIFLSVSNYIFTAIFVAEMMVKVVALGFFSGENTYLQ
SSWNVLDGVLVFVSIIDIIVSMASAGGAKILGILRVLRLLRTLRPLRVISRAPGLKLVVE
TLISSLRPIGNIVLICCAFFIIFGILGVQLFKGKFYCCEGPDTKNISTKADCTSMHYRWV
RRKYNFDNLGQALMSLFVLSSKDGWVNIMYDGLDAVGIDQQPVQNHNPWMLLYFISFLLI
VSFFVLNMFVGVVVENFHKCRQHQEAEEARRREEKRLRRLEKKRRSKELYVSEAQRRPYY
ADYSPTRRYIHTLCTSHYLDLFITFIIGVNVITMSMEHYNQPKSLDEALKYCNYVFTIVF
VFEAVLKLVAFGFRRFFKDRWNQLDLAIVLLSIMGITLEEIEMNAALPINPTIIRIMRVL
RIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLDCSEDN
PCEGLSRHATFTNFGMAFLTLFRVSTGDNWNGIMKDTLRECTREDKHCLSYLPIISPVYF
VTFVLIAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIELEMSRGGSTPANSGGGSGT
SASDVRAPYGSQEAMKPESPMRVKHQALEALSCENVSLAIPDSDPLEGRETPRMENTSFR
SVPHHHVLTPSHKTPGRESEEGAACVRAKREPQNFLTVRKISVSRMHSLPNDSYMFRPVM
PAKAPFPLHEVEMETYPCKSQRGSVTSIRSQPMETCSSLRVPRASLQVTAVSSHRDSCDA
WKILSPQSTSRSPSLNRLLCRQEAIRTDSMDGQNTDSKDSLQAESSESLQPKKQSQSSLG
PALLHPSPLSQPGTPPHSPTSSSHHRRSSVRTRKHTYSQHSIPSRPSSQNSNPASPENSL
FESSDLADEEVSHINSSVKDWQEQPEIRTRSVSPFISPASSLVPLKNCSTASLAGSNGRE
RDLKKFYSVDTKGFLDKPNWADDQRRHSIEICPSIDNGDGSLEQPAEEKQRSPVHVQSES
EYIHGARRKKKMSPPCISIDPPMEDESSAASRTKASENSMLRRRTPSCESTAYRDSLDLA
DNQPGEQASKAERRVQPTCRGEHLTIPNFSFEQSDPSSSSSLSDLLSDSGQGAPSSGVSV
DSRPDTAALELKKLDHLKTQCNNPEKNKELLGVTKSPIRRHGLVPMTVATDEDIDEPV
NT seq
7197 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcatcctgctgaactgtgtcaccttgggcatgttccagccctgcgaggacgtg
gactgcaagtcggagcgatgtaccatcctggaggcatttgaccatttcattttcgccttc
ttcgctgtggagatggtccttaagatggtagctctggggatcttcgggcagaagtgttac
ctaggagacacatggaatcgcctggacttcttcatcgtaatggccgggatgatggaatat
tctctggatgggcacaatgtaagcttatctgccatccgtactgtccgggtactcaggcct
ctacgagccattaacagggtcccaagtatgcgaatactcgttaccctgctgttagatact
ctgcctatgttaggcaacgtccttctcttgtgcttctttgtctttttcatctttgggatt
gtcggcgtgcagctctgggcagggctgctcagaaacaggtgtttcgtagacagcaacttt
gcaatgacatacaactttactctcccgcagccgtattaccagccggaagaaggggaggag
aatccattcatctgctcgtcccatcgggataacggcatgcagaaatgctccaatatccca
aacaggaaggagtacagggtggagtgcaccttgagcatggactcctacaaccaaaatttg
tataatccagatttcagcaacaggaacgcctgcataaactggaaccaatattacaacgta
tgcaaggcaggggatgtaaacccgcacaatggagctattaattttgataacattggctat
gcctggatagctatttttcaggttataaccctggaaggatgggttgacatcatgtattat
gttatggatgcacattctttttacaattttatatattttatattgcttataatagtgggt
tctttcttcatgattaacttgtgcctggttgtgatagcaacacagttttctgaaacaaag
cagcgggagaaccagctgatgaaggagcagcgtgcccgctacctctccaatgacagcaca
atcgctagcttctcggagccgggcagctgctacgatgagcttctcaaatatatctgccac
atcttcaggaaggtaaagcggcggacgttacgtctgtacaacaactggcagagcaagcgc
cggaaaaaggtcaaccccaacagcgcccccaacgggcaaagccgcagaagcaaaaaacgc
atcacctccatccaccacctcatccaccaccatcaccaccaccaccaccactaccacatc
agcaatgggagccctcgggggctacgttccaaccctgagatctgtgacctggagctgaag
gtcatgaagtctgggagccaactgatgcttccatctccatcccccaacctgcatagccct
cctcctcatctggattcagagtctgtccatagcatttaccatgctgactgccacgtcgaa
ggaccccaggtgaaatgcaagtcttccaatgccactgcaagtattaaactgaccgctggg
ctcaccaccaaccatggaaatatgaattatccaaccatcttgccttctccagctagcaaa
gccagttctgccccggtacccaaagggaagaaaagtggcagcagccctatggccatggtt
aatagcccagtgagtttgaatgcagctccttttgagaagctccgtcaactgatgggagaa
catggtctgtgtaggacttccagcaggctgtcgggtttgaacgtgccgtgccctctgccc
agcccccagcccagcatcctgacctgcgaactccagaactgcccctactgtgctaacatt
ctggaggatcccgagtttgagttcagtgagtccgacagctacgactctgacaacaacggc
gtctacgaattcacgcaggacctgaggcacggagaccagagagatcagatccagcagcag
aggaataagaagaggaagaagaagaaaccaaaggagaggaataaagtcgctagactttgg
gtggcttttggcaacaagctgaaaaggattgtggagagcaagtatttcaaccgtgggatt
atgatcgccattctgatcaacacgctgagcatgggaatcgagtatcacgaacagccggat
gaactgaccaacgctttggagatcagtaacattgtcttcaccagcatgtttgccctggag
atggtccttaagctccttgcctttgggatcttcggttatatcaagaacccatacaacatc
ttcgacgggatcatagtcatcatcagtgtctgggagatcattggccaatccgatggaggc
ctttctgtgctaagaacttttcggctgctcagggtcctcaagctggtacgcttcatgccc
gcccttcgccgccagctggtggtcctgatgaagacgatggataacgtggccaccttctgc
atgctgctcatgctcttcatctttattttcagcattctcggcatgcatctttttggatgc
aagtttagcttgaaaactgatacgggggacacagttccagacagaaagaattttgattcc
ttgctctgggccattgtgaccgtgtttcagatcctcacccaggaagactggaacgtggtg
ctctataatggcatggcatccacctcctcgtgggcggcactctacttcgtggccctgatg
acctttggcaactacgtgctcttcaacctcctagttgccatcctggtagaaggcttccaa
gcagagggtgacgccaacaagtcagacacggatgaggacaagacctctgccaactttgat
gaggatattgagaagctgaaagacctctgcgcaacagagatgaagatgtactcccttgcc
atcaccccaaacggtcacgtggagggcagggcgagcataccccctcccatcatcatgcgc
actgctgctactcccatgccaacgccaaagtgctcgccgcacatggattcggtgcacacc
ttcgtggactcaaggagagggagcaatgcttcagttgatccactgagctacgatcaaaag
tccttgtccagcctccgcagctcgccgtgtgcaaactggggacccaacagcaactgggga
agccgacgctcaagctggaacagcctcggcagggccccaagcctcaaaaagaagaaccag
tctggggaaagagagtccttgctctctggggaggggaaagggagcacggatgatgactct
gatgatgccaagtccagcactgtcagcagagccaccctgcaccgccgggcagagtccctg
gattacagaagctccttggacttgcctgagcttctccagctccccaccatgcgccactcc
ctcagcatcaaccccatcgccgtgctgcccacagagtaccaggactgcaatggcaaaatg
gtgcatgtgcccagcgagttcttcctgcgcatcgacagccacaaggacgacctcttggac
tacgacgacgacatggacgatagttactgctacaggattcgtaaagccctggagccctac
aaaccggaatggtgcaagaatcacgaagactggtctctctacttgttttctcctcagaat
cggattcgagcgatgtgccagaaggttatagcccacaaaatgtttgaccatgtggttctg
gtcttcatctttctcaactgcatcaccattgcactggagaggcccgatattgacccccac
agcacggagaggatatttctgagtgtctccaattacatcttcactgcaatctttgttgct
gagatgatggtgaaggtggtggcccttggcttcttctctggggaaaatacctatctccaa
agcagctggaatgtcctggatggggtcctggtctttgtatccatcattgatattatcgtc
tccatggcatcagcaggcggggctaagattttgggtatccttcgagtcttaagattgctg
cggaccttgaggcctctccgagtcatcagcagagccccaggtctaaaactggtggtggag
accttgatatcatccctgaggcctattggaaatattgtgcttatctgctgtgctttcttc
attatcttcgggatcttaggggttcagctttttaagggcaagttctactgctgcgaagga
ccagacaccaaaaacatctccactaaagccgactgcactagcatgcactacagatgggtc
cggcggaagtacaacttcgacaatttagggcaggctctgatgtccttgtttgtcctctca
tccaaagacggctgggtgaacatcatgtatgatggcctggatgctgtgggcattgaccag
cagcccgtccagaaccacaacccatggatgcttctctacttcatctccttcctgctcatc
gtgagctttttcgtgctcaacatgttcgtgggggtggtggtggagaatttccacaagtgt
cggcagcaccaggaggcagaagaggcccgtcggcgggaggagaagcggctgaggcgcctg
gagaaaaagcgcaggagtaaggagctatacgtgtctgaagcccagcgcagaccctactat
gctgactattccccgacgcggaggtatatccacaccctctgtaccagccactatctggac
ctgttcattactttcatcattggggtcaatgtcatcaccatgtcaatggagcactataac
cagcccaagtccctggatgaagctctgaagtactgcaactacgtgttcaccatcgttttt
gtgtttgaagctgttctgaagttggtggcatttggttttcgaagattctttaaagacagg
tggaaccagctggacctggccatagttctcctctcaatcatgggcatcacgctggaggaa
attgaaatgaatgccgcgctgcctatcaatcccacgatcatacgcatcatgcgggtgcta
cgcatagcaagagtgttgaaactgctcaaaatggccacggggatgcgagctctcttggac
acagtggtgcaggcgctaccccaggtagggaaccttggcctactttttatgctcctgttt
tttatctatgctgccctgggagtggagctgtttggaaagctagactgcagcgaagacaat
ccctgcgaaggtctgagccggcacgcaaccttcaccaacttcggcatggcctttctcacc
ctcttcagggtgtcgactggggacaactggaatgggatcatgaaggacacgctgcgggaa
tgcaccagggaggacaagcactgcctgagttacctgcccatcatctcccccgtctacttc
gtcaccttcgtcctcatcgcccagtttgtcctcgtcaacgtggtggtggccgtgctgatg
aagcacctggaggagagcaacaaggaagccaaggaggacgcggagatggacgcggagata
gagctagaaatgtccagaggagggagcaccccggccaacagcggaggtggaagtggcacc
tctgcctcggacgtcagggccccctacgggagccaggaggccatgaagccagagtccccc
atgcgagtgaaacatcaagccctggaggcactgagctgtgagaatgtgtctttagccatc
ccagactcagacccgctggagggcagagagactccccggatggaaaacacgtccttccgc
tctgttcctcaccaccatgtcctgacaccttcccacaaaaccccaggccgcgagtcagag
gaaggcgctgcctgcgtgagagcaaagagagagcctcagaacttcctaacggttcgcaag
atctcagtgtcccggatgcactccttgcccaacgacagctacatgttccgccctgtgatg
ccggccaaggccccgttccctctccatgaggtggagatggagacctatccctgcaaatca
caaagagggtctgtcacctccatccgttcccagcccatggaaacatgctcctctctgaga
gtcccaagggcgtcgcttcaggtgactgctgtatcttctcaccgcgacagctgtgacgca
tggaagatcctttctccacagtccacgtcgcgatctcccagtctcaacaggctgctgtgt
agacaggaggccattagaacggattccatggatgggcagaatacagattccaaggacagt
ctgcaagctgagtccagtgagagcctgcagccgaagaagcagtcccagagcagcttaggt
ccagctttgctccatcctagcccactctcccagccgggcactcccccacattccccgacg
tcatcctcacaccatcgacgttcgagcgttcgtacccgcaagcacacttacagccagcac
agtattccgagcaggccttccagtcaaaacagcaacccagccagccccgagaactcgctg
tttgaatcctcagacctggctgacgaagaagtcagccacataaacagctcggtaaaagac
tggcaagagcagccggaaatcaggacccgctcggtctctcctttcatctccccggcttca
tctctggtccccctcaagaactgcagcacagccagcctggccgggagcaatggcagagag
agagacttgaagaagttttacagtgttgatactaaagggttcctggacaagcccaactgg
gcagacgaccaaagaaggcactccatcgagatctgcccttccattgacaatggagatggt
agcttggaacagcctgcggaagagaagcaaaggtctcctgtccacgttcagtctgagtcg
gagtatatccacggggctcggaggaagaagaagatgagcccaccttgcatttctatagat
cctcccatggaggatgaaagcagcgcggcttcacgtaccaaagcctctgagaacagcatg
ctgaggagaaggacaccgtcgtgcgaatccaccgcgtacagggactccttggacctggcc
gacaatcagcccggggagcaggcttctaaagcagaaaggcgggtccagcccacgtgtcga
ggggaacacctgacaatcccaaacttctccttcgagcagtccgaccccagctcctcgagc
agcctctcggatctcctttcagacagcggccagggcgcgccctccagcggggtgtctgtg
gactcccggccagacaccgcggcgctagaactgaaaaagctggatcacttaaaaactcag
tgcaacaaccctgagaaaaacaaagagcttctaggcgttactaagagccccataaggcgg
cacggactggtccctatgactgttgcaacagatgaagacatagacgaaccagtatag
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integrated database retrieval system
