Emys orbicularis (European pond turtle): 135885390
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Entry
135885390 CDS
T11511
Symbol
HSPD1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135885390 (HSPD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eob03019
]
135885390 (HSPD1)
03110 Chaperones and folding catalysts [BR:
eob03110
]
135885390 (HSPD1)
03029 Mitochondrial biogenesis [BR:
eob03029
]
135885390 (HSPD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eob04147
]
135885390 (HSPD1)
Enzymes [BR:
eob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
135885390 (HSPD1)
Messenger RNA biogenesis [BR:
eob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
135885390 (HSPD1)
Chaperones and folding catalysts [BR:
eob03110
]
Heat shock proteins
HSP60 / Chaperonin
135885390 (HSPD1)
Mitochondrial biogenesis [BR:
eob03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
135885390 (HSPD1)
Exosome [BR:
eob04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135885390 (HSPD1)
Exosomal proteins of other body fluids (saliva and urine)
135885390 (HSPD1)
Exosomal proteins of breast cancer cells
135885390 (HSPD1)
Exosomal proteins of colorectal cancer cells
135885390 (HSPD1)
Exosomal proteins of bladder cancer cells
135885390 (HSPD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
135885390
NCBI-ProteinID:
XP_065269135
LinkDB
All DBs
Position
11:complement(56453161..56473534)
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AA seq
570 aa
AA seq
DB search
MLRLSTVLRQMRPVSRALAPHLLRTYAKDVKFGAEARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKAIDLKDKYKNIGARLVQDVANNTNEEAGDGTTTATVLA
RSIAREGFEKISKGANPVEIRRGVMLAVDAVIAELKKQSKPVTTPEEIAQVATISANGDQ
EIGNIISDAMKKVGRKGVITVKDGKTLNDELEIIEGMKFDRGYISPYFINTAKGQKCEFQ
DAYVLISEKKISSVQSIVPALEIANAHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIATGGAVFGEEGLGLNLEDIQPHDFGKVGEVIVTKDDSMLLKG
KGEKAQIERRIQEIIEQLEVTTSEYEKEKLNERLAKLSDGVAVLKVGGTSDIEVNEKKDR
VTDALNATRAAVEEGIVLGGGCALLRCIPALDVLTPVNEDQKIGIEIIRRTLKIPAMTIA
KNAGVEGSLIVEKIMQSPPEIGYDAMLGDFVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAEAVVTEIPKEEKEVPVGGMGGGMGGGMF
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgctccgtttatcaacagtactacgtcagatgaggccagtgtccagagcactggcccca
cacctactacggacctatgcaaaagatgttaaatttggagcagaggctagagctcttatg
ctacagggagtagatcttctagcagatgctgtagctgtcaccatgggaccaaagggtaga
acagtgattattgaacaaagctggggaagtcccaaggtaacaaaagatggtgtgacagta
gccaaggcaattgacttgaaagacaaatacaaaaacattggagccaggttagttcaagat
gttgccaacaacacaaatgaagaggcaggagatggaactactactgcaacagtactggcg
cgttccattgccagggagggctttgagaaaatcagcaaaggagctaatcctgtggaaatc
aggagaggtgtgatgctagcagtagatgctgtcattgctgaactaaagaaacagtccaaa
cctgttacaactccagaagaaattgcccaggttgctacaatctcagcaaatggggaccag
gaaatcggcaacataatctctgatgcaatgaaaaaagttggacggaagggtgttatcaca
gttaaggatggaaaaaccctgaatgatgagttggaaatcattgaaggtatgaagtttgac
cgaggctacatctcaccatatttcattaatacagccaaaggacaaaaatgtgaattccag
gatgcttatgtcttaatcagtgagaagaaaatttccagtgttcagtccatagttccagct
cttgaaattgccaatgctcaccgtaagcctttggtcattattgctgaagatgttgatggt
gaagctctcagtactctagtcttgaacagattaaaagttggtcttcaggttgttgctgta
aaagcaccgggttttggtgacaatagaaagaaccagcttaaggacatggcaattgctact
ggtggtgctgtatttggagaagagggtttgggtctcaatctagaagacattcagcctcat
gactttggtaaagttggtgaggtcatcgtgacaaaagacgatagcatgcttctgaaaggg
aagggtgaaaaggctcaaattgaaaggcgtatccaagaaatcattgaacaattagaagtt
actacaagtgaatatgagaaggagaaactaaatgaacgactggccaaactctctgatgga
gtagcagtactaaaggttggtggcacaagtgacattgaggtgaatgaaaagaaagacaga
gttactgatgcactgaatgctactcgtgctgccgtagaggaaggtatagttctaggaggt
ggttgtgcattgcttcgatgcatcccagcactagatgttttaacgccagtcaatgaagat
caaaaaattggcatagaaatcattaggagaacactgaaaattccagcaatgactattgct
aagaatgcaggtgttgaaggatcattgatagttgaaaaaatcatgcaaagtccacctgag
attgggtatgatgcaatgcttggagactttgtaaatatggtagagaaaggaatcattgac
cctacaaaggttgtaagaactgccttgatggatgctgcaggtgttgcttccctcttatcc
acagcagaagctgtagttactgaaattcctaaagaggaaaaggaagtgcccgtaggcgga
atgggtggaggaatgggaggtggtatgttctaa
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