Emys orbicularis (European pond turtle): 135886462
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Entry
135886462 CDS
T11511
Symbol
CHRNA4
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-4
KO
K04806
nicotinic acetylcholine receptor alpha-4
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob04080
Neuroactive ligand-receptor interaction
eob04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
135886462 (CHRNA4)
04082 Neuroactive ligand signaling
135886462 (CHRNA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
eob04040
]
135886462 (CHRNA4)
Ion channels [BR:
eob04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
135886462 (CHRNA4)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
135886462
NCBI-ProteinID:
XP_065270258
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Position
12:6049889..6086648
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AA seq
624 aa
AA seq
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MGFLVSKENLLLFLCANVFPVCSHVETRAHAEERLLKKLFSGYNKWSRPVANISDVVLVH
FGLSIAQLIDVDEKNQMMTTNMWVKQEWSDYKLRWDPLEYENVTSIRIPSELIWRPDIVL
YNNADGDFAVTHLTKAHLFYDGRIKWMPPAIYKSSCSIDVTFFPFDQQNCTMKFGSWTYD
KAKIDLVSMHSHVDQLDYWESGEWVIIDAVGNYNIKKYECCAEIYPDITYFFIIRRLPLF
YTINLIIPCLLISFLTVLVFYLPSECGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPL
IGEYLLFTMIFVTLSIIITVFVLNVHHRSPRTHTMPDWVKRIFLDVVPRLLFMQRPSVVK
DNCKKLIESMHKIASSPQLWSETEVEPKFTTSSSNSPQSKEPSPTSSFCAHLEEQVKPQT
VGKSPSLQYSVLHQEPAQASCSSLQPPCHPLSDTQSTSISKSRSLSVQQMYSPNKVEDGS
IRCRSRSIQYCYLQEESSQTNGQTSGSPAAQRYRLNEKQPQSKASQCKCKCKKNVATSSS
EQGTKTLSTKEQHVLLMSPALKLAVEGVHYIADHLRAEDADFSVKEDWKYVAMVIDRIFL
WMFIIVCLLGTVGLFLPPWLAGMI
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgggatttctagtttctaaagaaaaccttctcctcttcctttgcgctaacgtcttccct
gtgtgcagccatgtggaaacccgagcccatgcagaggagagactcctgaagaaactcttc
tctggctataacaagtggtcccgacctgtagccaacatttcagatgtggtcctcgtccat
ttcggattgtccatcgcgcagctcattgacgtggatgagaagaatcaaatgatgaccacg
aacatgtgggtgaagcaggagtggtctgactacaagttgcgctgggatcctctggaatac
gagaacgttacatccatccgcatcccttcagaactcatttggaggccggatattgttctc
tacaacaatgcagatggggactttgcagtcacccacctgaccaaagcccaccttttttat
gatggaagaatcaagtggatgccccctgctatctacaaaagctcctgtagcattgatgtc
accttcttcccctttgaccagcaaaactgcaccatgaagtttggctcctggacctatgac
aaagccaagatagacttagtgagcatgcacagccatgtggaccaattggactactgggag
agtggagaatgggtcatcatcgatgctgtgggcaattacaatatcaagaaatatgagtgc
tgtgcagagatctaccctgatatcacctacttctttattatcaggaggctgcccttgttc
tacacaattaatctgatcatcccttgcctccttatctccttcctgactgtcttagtcttc
tacctgccttcggagtgtggtgagaagatcaccctttgtatctcagtgctgctgtcactg
accgtgttcctgctgctcattacggagatcatcccttccacctccttggtcatccccttg
attggagagtatctgcttttcaccatgatatttgtcaccttgtccatcatcatcactgtc
tttgtgctcaacgtgcaccaccgctccccccggacccacaccatgcccgactgggtgaag
cggatctttctcgatgttgtcccacgcctcctcttcatgcaacggccctcagtggtgaag
gacaattgcaagaagctgattgagtccatgcacaaaatagcctcctctccacagctttgg
tccgagaccgaagtggagcctaagtttactacctcctcttcaaacagccctcagagcaaa
gaaccatcacccacctcttccttctgtgcccatcttgaggagcaagtcaaaccccagact
gtcggcaagtcaccgtctctccagtactctgtgctacaccaagagccagcacaggctagc
tgctcctccctgcagcccccctgccatccgctgagtgacacccagtccacgtccatctcc
aagagcagatcattaagtgtccagcagatgtacagcccaaataaagtagaggatgggagc
atccgctgcagatccaggagcatccagtactgctacctgcaagaggagtcctcccagacc
aacggccagaccagtggctctccggcagctcagcggtaccgtctaaacgaaaagcagccc
caaagcaaagcctcccagtgtaaatgcaagtgtaaaaagaatgtggcaaccagttcttcg
gagcaaggaaccaaaactctcagcaccaaagagcaacacgttttgctgatgtcccctgcc
ttgaagctggcagtggagggggtccattacattgcagaccacttgagagccgaggatgcg
gatttctcagtgaaggaagactggaagtacgttgcaatggtgatcgacagaatcttcctt
tggatgttcatcatagtctgcttactgggcaccgttggtctcttccttcccccttggctg
gcaggaatgatctaa
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