Emys orbicularis (European pond turtle): 135886569
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Entry
135886569 CDS
T11511
Symbol
CDH4
Name
(RefSeq) cadherin-4 isoform X1
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob04514
Cell adhesion molecule (CAM) interaction
eob04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
135886569 (CDH4)
04519 Cadherin signaling
135886569 (CDH4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
eob04515
]
135886569 (CDH4)
Cell adhesion molecules [BR:
eob04515
]
Cadherins
Major cadherins
135886569 (CDH4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
CADH_Y-type_LIR
Cadherin_FAT4_N
Ig_CLSTN
F59B103_C
NCMAP
Stevor
DUF5527
Motif
Other DBs
NCBI-GeneID:
135886569
NCBI-ProteinID:
XP_065270392
LinkDB
All DBs
Position
12:complement(8745733..9395842)
Genome browser
AA seq
916 aa
AA seq
DB search
MTIGSGMLLLLLLPFCGSARAHNGDLTVRPTCKPGFSEEDYTALVSPNIVEGQKLLKVKF
SDCPGNNGIRFETNNLDFKVRTDGTIYAAHQVQIPLKQTVFMVTAWDHQTLERWETMVRL
LVGEKTQHNGHKPQKGKKNASTDLAPQPSDTLIPWRQPQNSNGLRRQKRDWVIPPINVPE
NSRGPFPQQLVRIRSDKDSEIHIRYSITGVGADQPPMEVFSIDPVSGRMYVTRPMDREER
ASYHLRAHAVDMNGNKVENPIDLYIYVIDMNDNRPEFINQVYNGSVDEGSKPGTYVMTVT
ANDADDSTTANGMVRYRIVTQTPQSPSQNMFTINSETGDIVTVAAGLDREKVQQYTVIVQ
ATDMEGNLNYGLSNTATAIITVTDVNDNPPEFTASTYSGEVPENRVEVVVANLTVVDRDQ
PHSPNWNAVYRIISGDPSGHFTIRTDPITNEGMVTVVKAVDYEMNRAFMLTVMVSNQAPL
ASGIQMSFQSTAGVTISVTDINEAPYFPTNHKLIRLEEGVPMGTALTTFSAVDPDRFMQQ
AVRYSKLSDPANWLNINATNGQITTAAVLDRESVYIKNNVYEATFLAADNGIPPASGTGT
LQIYLIDINDNAPELLPKEAQICEKPNLNVINITAADADIDPNVGPFVFELPSVPSAVRK
NWTITRLNGDYAQLSLRIMYLEAGMYDVPIVVTDSGNPPLYNTSIIKVKVCPCDENGDCT
TIGAVAAAGLGTGAIIAILICIIILLTMVLLFVVWMKRREKERHTKQLLIDPEDDVRDNI
LKYDEEGGGEEDQDYDLSQLQQPETMDHVLNKAPGVRRVDERPIGAEPQYPIRPVIPHPG
DIGDFINEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSSSSGDQDYDYLNDWG
PRFKKLADMYGGGEED
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgacaattggctccggaatgctacttctgctgctgcttcccttctgtggctcggcgagg
gcgcacaatggggatcttacagtcagacccacttgcaagcctggcttttcagaagaagat
tacacagctttggtttcgccaaatatcgtggaagggcagaagttactcaaagtgaaattt
agtgactgtcctgggaacaatggaattcggttcgaaaccaacaacttggacttcaaagtg
aggacagatgggaccatatatgctgcccaccaggtgcaaatccccttgaagcagacagtg
tttatggtaactgcatgggaccaccagaccctagagagatgggagacaatggtcagatta
ctggttggggagaaaacacagcacaatggacacaagccgcaaaaagggaagaaaaatgca
tctacggatcttgcaccgcaaccgagtgacacattaataccgtggcgccagccccagaac
tctaacgggctgagaaggcaaaagagagactgggtcatcccaccaatcaatgtgccagaa
aactcaagagggcccttccctcagcagctggttaggattcgttccgataaggacagtgag
atccatatcaggtacagcatcactggagtaggagctgaccaaccacctatggaagtcttc
agcattgatcctgtgtctggcagaatgtatgtgacacgtccaatggacagagaagaaaga
gcctcctaccatctgagggctcatgcagtggatatgaatggaaacaaggtggagaacccc
attgacctctacatctatgtgattgatatgaatgacaacaggcctgagtttataaaccaa
gtctataatggatctgttgatgaaggatctaaaccagggacctatgtgatgacggtgact
gcaaatgacgctgatgatagtactacagccaatgggatggtgagataccggattgtcact
cagaccccacagagtccatcacaaaatatgtttaccattaatagtgaaacaggagacatt
gtcacagtggctgctggacttgacagagagaaagttcagcagtacacagtcatcgttcag
gctacagatatggaaggaaatcttaactatggtctctcaaacacagcaactgcaatcatt
acggtgacagatgtgaatgacaacccaccagaattcactgccagcacttattccggggag
gttcctgagaacagagtggaagttgtggttgcaaatttgactgtggtggaccgggaccag
cctcactcccccaactggaacgccgtgtaccgtattatcagtggagatccttctggtcat
ttcaccattcggacggatccaattaccaatgaaggcatggtaactgtggtgaaggctgtc
gattacgaaatgaacagggctttcatgctgacagtgatggtgtcaaaccaagctccacta
gcaagcggaatccagatgtccttccagtctacagcaggagtcaccatttcagtcacggat
atcaatgaggcaccctattttccaacgaaccacaagttgatcaggctggaggaaggggtg
cccatggggacggcattgacaacattttcagctgtggatcctgatcgcttcatgcagcaa
gcagtaagatactccaagctgtcagatcctgcaaactggctgaacattaatgccacaaac
ggtcagatcactactgctgctgtccttgatcgagagtcagtctacattaagaataatgtc
tatgaggccacgttcttggcggctgacaacggtatccccccagcaagtggcactggcact
ctgcagatctatctaattgacatcaatgataatgctcctgagctcctgccaaaggaggca
cagatctgtgaaaagccaaacctgaatgtcatcaacataacagccgcagatgctgacatc
gatccaaatgttgggccctttgtcttcgagctgccaagtgtgccatctgcagtcaggaag
aactggaccataacaaggctaaatggtgactatgcccagctcagtttgcgaataatgtat
ctggaagctggtatgtatgatgtcccaattgtcgtgacggattcagggaaccctcccttg
tacaacacttccatcattaaagtgaaggtgtgtccatgtgatgagaatggagactgcact
accatcggggctgtcgctgcagctggcctgggaacaggtgccatcatagcgatcttgata
tgcatcattattttactaaccatggtcttgctgtttgtggtgtggatgaaacgcagggaa
aaggagaggcatacgaagcaacttctgatcgaccctgaagatgatgtgcgggacaacatt
ctgaaatacgatgaagagggaggtggagaggaagaccaggattatgatttaagccaactt
caacagccggagactatggatcatgtactgaacaaggcacctggagtcagacgagtggat
gagagacccattggtgctgaaccccagtatcctataagaccagtaatcccccatcctggg
gacattggtgactttattaatgagggcttgagagcagcagataatgaccctacagcccca
ccgtatgattccttgctggtcttcgactacgaggggagtggatctactgcaggctctgtc
agctccctcaactcctcaagctccggtgatcaggattacgactaccttaatgactggggg
cctaggttcaagaaactggcggacatgtatgggggaggcgaggaagattaa
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