Emys orbicularis (European pond turtle): 135886849
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Entry
135886849 CDS
T11511
Symbol
APEX1
Name
(RefSeq) DNA repair nuclease/redox regulator APEX1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
135886849 (APEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eob03400
]
135886849 (APEX1)
Enzymes [BR:
eob01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
135886849 (APEX1)
DNA repair and recombination proteins [BR:
eob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
135886849 (APEX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
135886849
NCBI-ProteinID:
XP_065270711
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All DBs
Position
12:complement(38541583..38544905)
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AA seq
318 aa
AA seq
DB search
MPKRGKKAEDVDSADELEATEPEAKKSKKGAAKGPKEKVVEGPILYQDPPNKLTSPSGQK
YTLKVTSWNVDGLRAWVKKKGLEWVREEDPDVLCLQETKCAEKLLPPEMREMPEYPHKYW
ACAGAKEGYSGVALLCKTEPLSITYGIGEVEHDQEGRVITAEFPSHFLVTAYVPNAGRGL
VRLEYRQCWDAAFQAYLRGLDARKPLVLCGDLNVAHAEIDLKNPKGNKKSAGFTPEERQG
FGELLTAGFTDTFRHLYPETPHAYTFWTYMMNARAKNVGWRLDYFLVSTRLLGALCDSKI
RSQAMGSDHCPITLYMAL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaacgggggaagaaggcagaggatgtggacagcgcggacgagctcgaggccaca
gagcccgaggcaaagaagagcaagaagggggcagccaagggccccaaggagaaggtggtg
gagggccccatcctgtaccaggatccgcccaacaagctcacctcccccagtgggcagaag
tacaccctgaaggtcacatcgtggaacgtggacgggctccgggcctgggtcaagaagaag
gggctggagtgggtgcgtgaggaggaccccgacgtgctgtgcctgcaggagaccaagtgt
gcagagaagctgctgccccccgagatgcgggagatgcctgagtacccccacaagtactgg
gcctgcgccggtgccaaggagggctacagcggggtggctctgctctgcaagactgagccg
ctcagcatcacctatggcatcggtgaggtggagcacgaccaggagggccgggtgataacg
gctgagttcccctcgcacttcctggtgacggcctacgtgcccaacgcgggccgggggctg
gtgcggctggagtaccgccagtgctgggacgccgccttccaggcctacctgcgggggctg
gatgctcgcaagcccctggtgctgtgcggggacctcaatgtggcccacgccgagatcgac
ctgaagaaccccaagggcaacaagaagtcggcaggcttcacgcccgaggagcgccagggc
ttcggggagctgctgacagctggcttcaccgacaccttccgccacctctaccctgaaacg
ccccatgcctacaccttctggacctacatgatgaatgctcgcgccaagaatgtgggctgg
cgccttgactacttcctggtctcgacgcgcctgctgggggcgctatgcgacagcaagatc
cgctcccaggcaatgggcagtgaccactgccccatcaccctctacatggccctgtga
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