Emys orbicularis (European pond turtle): 135887487
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Entry
135887487 CDS
T11511
Symbol
PWP1
Name
(RefSeq) periodic tryptophan protein 1 homolog isoform X1
KO
K14791
periodic tryptophan protein 1
Organism
eob Emys orbicularis (European pond turtle)
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eob03009
]
135887487 (PWP1)
Ribosome biogenesis [BR:
eob03009
]
Eukaryotic type
90S particles
Other 90S particles
135887487 (PWP1)
Pre-60S particles
Other pre-60S particles
135887487 (PWP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
EIF3I
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR55
Beta-prop_WDR3_2nd
WD40_RFWD3
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR41
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_Aladin
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_IFT122_1st
Beta-prop_ACSF4
Motif
Other DBs
NCBI-GeneID:
135887487
NCBI-ProteinID:
XP_065271305
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All DBs
Position
1:complement(102417167..102448943)
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AA seq
500 aa
AA seq
DB search
MSCPVTCAAWVRRGVARGTPDKVRLCAEELKRLIGEAAETLREEVDGSDEEEHGQAAEDI
MDVASGETVEPAQEDGDQEEDTEKLNDDELAEYGLDKYDEEENTDAVSLGDTLAGLTVYG
SNERDPYVTIKDTEQYEQEDFLIKPSDNLIICGRVDKDHCSLEVHLYNHEEDSFYVHHDI
LLPAYPLSVEWLNFDPNPDESPGNYVAVGNMTPVIAIWDLDIVDSLEPVFSLGSKKEKKK
KKKKGKKNSSTEGNQDGHTDAVLDLSWNKQNRNVLASASADNTVILWDMSVGKPAANLTL
HMDKVQTLQFHPFETQTLVSGSYDKSAVLYDCRSPQDNHRIWRFSGQVERVTWNHFSPCN
FLASTEDGFVYCLDARSDKPLFTLKAHNEEVSGLQLSSQIKGCLVTSSADKYVKIWDILG
DKPSLIHSRDMKMGVLFCAACCPDLPFVYAFGGEREGLRVWDISSISAVNEVFGSRERLV
AANTNSGTGSSFASSSSKSP
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagctgccccgtgacttgcgccgcctgggtgcgcaggggggtcgccaggggaacgccc
gacaaggtgcggctctgcgcggaggagctgaagcggctcatcggggaggccgcggagacg
ctgcgagaagaagtagatggtagtgatgaagaagaacatggacaggctgcagaagacatc
atggatgttgctagtggtgagacagttgagcctgctcaagaagatggggaccaggaagaa
gacactgaaaagctgaatgatgatgagctggcagagtacggtttggataaatatgatgaa
gaggagaatacagatgctgtgagccttggagacaccttagccggtcttacggtgtatggg
agtaacgaacgtgatccttacgtcactattaaagatactgagcaatatgaacaggaagat
tttttgattaagcccagtgacaatctgatcatttgtggaagagttgataaggaccactgc
agtctagaggttcacctttataatcatgaagaggactcattttatgtacaccatgatatc
ctcttacctgcataccctctaagtgtggagtggcttaattttgatcctaatcctgatgaa
tctccaggaaattatgttgcagtgggtaacatgacccctgttattgcgatctgggacctt
gatatagtggattctctagagccagtcttttcccttggaagtaaaaaagaaaagaagaag
aagaagaaaaagggaaagaagaattcatctacagaagggaatcaggatgggcatactgat
gcagttcttgacctttcatggaataagcaaaacagaaatgtgttagcaagtgcttcagct
gacaacactgtaattctgtgggatatgtccgtgggtaaaccggcagcgaaccttacttta
catatggacaaggtccagacactacaatttcatccatttgaaacacagacgcttgtttct
ggatcttatgataagtctgctgtcctgtatgactgtagaagtcctcaggataaccatcga
atctggcggtttagtggacaggttgagagagtgacttggaatcatttttcaccttgtaac
ttcttagctagcacagaagatggctttgtgtactgtctagatgctcgttccgataagcca
ctttttactctgaaggctcataatgaggaagtatctggactccaattaagcagtcagatc
aaagggtgccttgtgacatcatctgctgacaaatatgtaaaaatttgggatatactgggg
gacaaaccaagtctgatccattccagggatatgaaaatgggtgttctcttctgtgcagct
tgttgccctgatttgccatttgtctatgcctttggaggggagagagaagggcttcgagtc
tgggatataagcagtatttctgcagtgaatgaagtttttggaagcagagagaggttggta
gctgccaatacaaactctggaactggcagctcctttgccagcagtagcagcaaaagtcca
taa
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