Emys orbicularis (European pond turtle): 135888832
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Entry
135888832 CDS
T11511
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
eob Emys orbicularis (European pond turtle)
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eob03036
]
135888832 (CHD9)
Chromosome and associated proteins [BR:
eob03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
135888832 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Motif
Other DBs
NCBI-GeneID:
135888832
NCBI-ProteinID:
XP_065272691
LinkDB
All DBs
Position
14:30176528..30362019
Genome browser
AA seq
2891 aa
AA seq
DB search
MTDPMMDFFDDANLFSETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQDTQ
TQQKMSEFEQLNQYDSLKLQVNQSFSSPADSVLSPHSQFNCSPIHPQNQSNGMFPDVADG
SPMWGHQTTTTVPNQNGSPFHQGHSQSMQQTKSFVAHHDFALFQANEQQHQCASLQSQQS
RNNINAGQDALNQPKTFMEVNVSAPRRVSVTHPPQIANPSTSQQPLSVQQFSQNASASIH
FCGNQEGNFDGQSPTMTPCSVNNTQQFPSPYSYSNNHISPTSLLQSSTALSTSQQTHPLS
DYTGSDAFTSQTGTKQETTEHLLNPNTPLNSNSFQMLHSAHPQGSFSSSKLSPVNINFPA
SAGSASQISHFGDPIESNGFSSLDENLLHQVESQAEPFTGLDPEDLLQEDLLPQFDDSAF
VQDTSSHILEHDLEHHITPQQITPSSDIARTQSQNQMHPWHSSVSNRHLQDRNRIALQGQ
PPSSKKTDVSGTYTKLQNTQVRAMSEKKQKKKVESESKQEKANRIISEAIAKAKERGERN
IPRVMSPENFPSVSAEGREEKKGRKIKSKPKDKESKKTKTGSSSKIKDKTKIGKLIITLG
KKQKRKNESSDEMSDTKQTPQRSFKDEDSQKRRSNRQVKRKKYAEEGEGKQSEEEAKVSV
KIKKSSAPLPAEQPLQLFVENPSEEDAAIVDKILSSRIVKKEISAGMTMEEEEFFVKYKN
YSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRVLEVS
FCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRRLDRPPP
NSWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEI
LLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSMVSRQMIQQYEMYFRDSQGRI
IRGTYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKV
LLTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRL
KEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRK
CCNHPYLIKGAEEKILGEFRETYIPTAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVL
IFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGG
LGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASL
KLGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQI
LQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDTISGRNS
LVIDTPRIRKQTRPFSATKDELAELSEAESEGDDKPKLRRPCDRSSGYGRTECFRVEKNL
LVYGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTED
GQTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIKH
HCNKVLLRVRMLYYLKQEVIGNECQKVFDGVDASEVDVWVPEPEHSEVPAEWWDADADKS
LLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYIDGDVEDPEYKPAPA
MFKDDMEDDASSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQRTSKNRQAQ
QIQPTFPVQATVMQPPYEEAALNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPDGG
RFDWTKFRAMARLHKKTDESLEKYLYAFMSMCRRVCRLPSKEELVDPTIFIQPITEERAS
RTLYRIELLRKVREQALRHPQLFERLKLCQPNPDLPVWWECGTHDRDLLIGAAKHGVSRT
DYHILRDPELSFMSAQRNYSQNKVALSRTSTPLLHQYQMALSASPLTPQSRLPDTKGNAL
EDTKVKNENLKEDPQSSEEESMSTEETRTMMKSEPLSPKNGTPLQTTDHKPGVKNETDRR
MVAARTEPLTPNPASKKQRVNKRGSDSSSDSDSDSDRSSCSSRSSSSSSSSSSSCSRSRS
GSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSDDEEAQKRAEGTPHIKAYDEESV
ASLSTTQDETQDCFQLNNGTPNSNYLLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKW
PSARRSYDSNTVASFYTTKLLDSPGAAADYSEPSAPTPPTAGVKEEHDQSPQMPKVKKHV
REKEFTVKINDEGGLKLTFQKQGFSQKRLFESEEGTLGQQQYLARLRELQNASETSLVNF
PKSLPESGASNQLTANANGVIVDSQPVVKKRRGRRKNVEGVDILFINRNKPPNHVSPGIN
TSQVAPVINPTLTYAQSQGLLDAESPVPVINLKDGTRLAGDDAPKRKDLEKWLKEHPGYV
EDLGAFIPRMQLHDGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAPPL
KDLCRFLKENPEYGVAPEWGDVVKQSGFLPEGMFDRILTGPVVREEVSRRGRRPKSEIAK
ATAAAAAATAANVSVNPLLANGLLPGVDLSTLQALQQNLQNLQSLQVTAGLMGMPAGLTT
GGEAKNMAAMFPMLLSGMAGLPNLLGMGGLLTKSTESVSEEKKGNDSKEPDVKKERTENQ
HANNGGEDSVSSSPSTSSAAANPLALNPLLLSNILYPGMLLTPGLNLHIPALSQSNIFDV
QNTENNDTGSAKATEEKEENSRIRDQEDKGGTEPSSHNENSTDEGSEKADASSGSDSTSS
SSEDSDSSDED
NT seq
8676 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcctatgatggatttttttgatgatgccaacctttttagcgagacgttggaa
ggtttgtcggatgatgcctttgtacaacctggacccgtttcacttgttgatgaattgaac
ttgggtgcagaatttgagcctttgcacatagactcattgaaccatgtgcaagatactcaa
actcaacaaaagatgagcgaatttgagcagttaaatcagtatgattcactgaaacttcaa
gtaaatcagtctttcagcagcccagctgacagtgttttatcgccacactctcaatttaat
tgctcaccaatccatccacaaaaccaatccaatggaatgtttcctgatgtggctgatggt
agtcctatgtggggtcatcaaactaccacaactgttccaaatcaaaatgggtcccctttt
caccaaggacattctcagtctatgcagcaaactaaaagttttgtagcacaccatgacttt
gccttatttcaggccaacgaacaacagcatcagtgtgcctcactacagtcgcaacaaagc
agaaacaacattaatgcagggcaagacgctctgaatcagccaaaaacctttatggaggtt
aacgtatctgctccacgcagagtcagtgttacccatccacctcaaattgctaatccatca
acttcacagcagcctctctctgttcaacagttttctcaaaatgccagtgcttcaatacat
ttttgtgggaatcaagaaggaaactttgatggacaatctccaactatgactccttgctct
gttaataatacacagcagtttccttctccatattcttactctaataaccacatttctcct
accagccttctacagtcttctaccgctctttctactagccaacaaacgcatcctttatct
gattatactggaagtgatgcctttacatctcaaacagggaccaagcaagaaaccaccgag
cacctcttgaatcctaacacacctttaaattcaaatagtttccaaatgttgcattcagca
catcctcagggcagcttcagtagttcaaaactctctcctgtgaacattaattttccagcc
tctgcgggttctgcttctcagataagccatttcggtgatcctatagaaagcaatggtttt
tcatctttggatgagaacttacttcatcaagttgagtctcaagctgaaccatttacagga
cttgatccagaggacctccttcaggaagatctcctaccccaatttgatgattcagcattt
gttcaggacacttcaagccacatattagagcatgacctagaacaccatattaccccacag
caaataacaccgtcatccgatattgctcggacacagtctcaaaatcagatgcatccctgg
cattcttcagtttctaatcggcatctacaagacagaaatcgtatagctttgcaagggcag
cctccctcctccaagaagactgatgtttcagggacatatactaaattgcagaatacccag
gtgagggcaatgtctgaaaagaaacagaagaaaaaagtggaatcggaaagtaagcaggag
aaggctaatcgtataatatcggaggcaatcgcaaaagcaaaagagagaggggagagaaac
attccacgagtaatgagccctgaaaacttccccagtgtttcggctgaaggaagagaggaa
aagaaaggtagaaaaattaaatccaaaccaaaggacaaggagagcaaaaaaactaaaact
ggttcctcatccaaaattaaagacaaaacaaaaattggcaagcttataatcacattgggt
aaaaagcagaagagaaagaatgagtcttcagatgaaatgtctgatactaagcagactcca
cagcggtcatttaaagatgaggactctcagaagagaagatcaaatcgtcaagttaaaaga
aaaaagtatgctgaggaaggagaaggaaaacagtccgaggaagaggctaaagtttctgtg
aaaatcaaaaagagttctgcgcctttgcctgctgaacaacccttacagttatttgtggag
aatccaagtgaagaagatgcagcaattgtagataaaattttatcctccaggatagtgaag
aaagaaatatctgctggaatgacaatggaagaagaagaattttttgtaaaatacaagaac
tactcctatcttcactgtgaatgggccacagaacagcagcttttgaaggataaaagaatc
cagcagaaaattaaacggttcaagctgaggcaagcacaaagagcccacttttttgcagat
atggaagaagaaccttttaatcctgactatgttgaagtggaccgggtgctagaagtctcc
ttttgtgaagataaggacactggtgagcctgttatttactacctagtaaaatggtgttca
ttgccatacgaagacagcacctgggagttaaaagaagatgtagaccaggcaaaaatagaa
gaatttgaacaactgcaagcttccaggcctgactcaaggagattggaccgacctcctcct
aattcctggaagaagatagaacagtccagagaatataaaaatggcaaccagctcagggaa
taccaactggaaggactcaactggctccttttcaactggtacaatagacgaaactgcatt
ttagcagatgaaatgggtcttggcaaaaccatccagtcaattacattcctctatgaaatc
ctcctgactggtatacgagggcctttcctgatcatagctccactttccactataaccaat
tgggaaagagaatttcgcacgtggactgatcttaatgtcgtggtatatcatgggagcatg
gttagcaggcagatgatacagcagtatgagatgtacttcagggactcacagggacgtatc
attcgaggtacttaccggttccaagctattatcaccacttttgaaatgattcttggtggc
tgtccagaactcaatgcaattgaatggcggtgtgttattattgatgaagcacacaggctg
aagaataaaaattgcaaactcctggagggactcaaactcatgaatcttgagcacaaagtg
ctgttgacaggcacaccactgcagaacacagtagaagaactgtttagcctgcttcatttt
cttgaacctttgcgttttcctgctgaatctacattcatgcaggaatttggggaccttaaa
acggaggaacaggtgcaaaagttacaagctatcctgaaaccaatgatgctgagacggttg
aaggaagatgtagagaaaaaattagctcccaaggaagaaactataattgaagtagaacta
actaatatccagaagaaatattatcgggcaattttggagaagaactttgcattcttgtcg
aaaggagctggccaagctaatgtacccaatctagttaacactatgatggaactcagaaag
tgctgcaaccacccgtatcttatcaaaggtgctgaagagaaaatccttggggagtttagg
gaaacatatatcccaactgctcctgattttcatctacaagcaatgatccagtctgctggt
aaattggtcctcattgataaacttctcccaaaaatgaaagcaggaggccataaggtgctt
atcttctctcaaatggtgcgctgtcttgacatccttgaggactaccttatacataaaagg
tacttatatgaaagaattgatgggagagtgagaggaaatctgaggcaagctgctattgat
cggtttagcaaaccagactctgatcggtttgtgtttcttctgtgtaccagagctggtgga
ttgggcattaatttgactgcagctgatacatgtataatttttgattctgactggaatcct
cagaatgatctccaggcccaagcccgttgtcacaggattggtcagaacaaagcagtaaag
gtctacagattgataactcggaactcatatgagagagagatgtttgacagagcaagtctg
aaattgggtctggataaagctgttttacagagcatgagtggaagagaaaatagtgttggt
ggtatccaacagctttccaaaaaagaaatagaagacctgcttcgaagaggtgcctatggt
gctattatggatgaagaggatgagggctctaaattctgtgaagaagatatagaccaaatc
ttgcagcgccgtacgaaaactatcacaattgaatcagaaggaaggggttcaacatttgcc
aaggctagttttgttgcatctggaaataggactgatatttcattagatgatcccaacttc
tggcagaaatgggccaaaaaagcagaaatagatatagataccatcagtggtagaaacagc
ctggttattgataccccaagaattaggaagcaaacaagaccctttagtgccacaaaagat
gagctggctgagttatcagaagcagagagtgaaggggatgataaaccaaaactccgcagg
ccttgtgaccgctccagtggatatggaagaacagagtgctttcgggtggagaaaaactta
ttagtctatgggtggggtcgttggagagagattttatcacatggtcgcttcaagaggcaa
ctaaatgaacaggatgtggagataatttgccgagcactcctagcatattgccttgttcac
tacagaggagatgaaaagataaaaagttttatatgggatctcatcaccccaacagaggat
gggcaaacacgagagctacagaatcacctaggtttgtcagcacctgttcccaggggtaga
aaaggaaagaaagtgaagactcaggctagcacatttgatatacataaagcagaatggctt
cgaaaatataatccagaacatctactgcaagatgaaggatataaaaaacacataaagcat
cactgcaataaggtcttgcttcgagtacgaatgctgtattacttaaaacaagaagtcatt
ggtaatgaatgccaaaaagtgtttgatggagttgatgccagtgaagttgatgtttgggtc
cctgagccagagcattctgaggtccctgcagaatggtgggatgcagatgcagataaatcc
ctcctaattggagtttttaagcatggctatgaaaagtacaacactattagagcagatccc
gcactctgtttcttggaaagggtgggcaaaccagatgagaaagcagttgctgctgaacaa
agagcaaatgattacattgatggggatgtagaagatccagaatataaaccagccccagca
atgtttaaagatgatatggaggatgatgcttcatcgccaggagatctagtaatagctgat
ggagatggtcagatgatggaaggagacaaaatttattggcccactcagtctgctttaaca
acacgtctgcgccgcctaataacagcctaccaacgtactagtaagaacaggcaggcccag
caaatccaaccaacgtttccagttcaggccactgtaatgcagcctccatatgaagaagct
gctctaaatccaaaaatggcagccaagattgaaaggcaacaaagatggacaagaagagaa
gaagctgatttttacagggttgtatccacatttggagtggtgtttgatcctgacgggggt
cgatttgactggacaaaatttagagccatggctaggctacataagaaaacagatgagagt
ttagagaagtacttgtatgcatttatgtctatgtgcaggagagtctgtcgccttccctca
aaagaagaacttgtagacccaaccatttttatccaaccaattacagaggagcgtgcttct
cggaccttatatcgcattgaactcctgaggaaggtacgagaacaggccctacgacatcca
cagctgtttgaacgcttgaaactttgtcagccaaatccagacttgccagtctggtgggag
tgtgggactcatgacagggatttacttattggagctgctaaacatggggttagcagaaca
gactatcacattcttcgtgatcctgaactctcatttatgtctgcccagaggaattacagt
cagaataaagtggcgctatcaaggacttctactccacttttacatcagtatcagatggca
ttgtctgcgtctcctcttacacctcagtcaagattgccagatactaaagggaatgctctt
gaggatacaaaagttaaaaatgaaaaccttaaagaggaccctcagtcgtctgaagaggaa
tctatgtctactgaggaaacacggacaatgatgaaatctgaacctttgagccccaaaaat
ggcacgccattacagactacagaccacaaacctggtgtgaagaatgaaactgacaggcgt
atggttgcagcaaggacagagcccctaactccaaaccctgcttccaaaaaacagagagtc
aacaaaagagggtcagactctagttctgattctgactctgattcagacagatcatcctgt
tcttccaggtcatcttcatcgtcctcttcctcttcctcttcttgttcacgctcccggtca
ggatccagctcttcatcctcctcctcttgttcttcagcatcctcttcctcttcatcctct
tcctcttcatcatcgtcgtcatcatcgtcgtcatctgaagagagtgacagtgatgacgaa
gaggcacaaaagcgagcagaaggaacccctcacatcaaagcatatgacgaagagagcgta
gcctctctgagcaccacacaagatgagacccaggactgtttccagttgaacaacgggacg
ccaaattccaactatctcttgcaaggtggatatatgttggctgcatcctattggccaaag
gatcgagttatgattaaccgactagacagtatttgtcaaacagtgttgaaaggtaaatgg
ccttcagcaagaagaagttatgacagcaatacagtagcatctttctacacaaccaaactt
ctggacagcccgggtgcagctgcagactacagtgaacctagtgcaccaacacccccaact
gcaggtgttaaggaagaacatgatcagtcgccacagatgccaaaggtgaagaagcatgta
cgagaaaaggagtttacagtgaaaatcaatgacgaaggtggtttgaaattgacttttcag
aagcaggggttttctcagaaaaggctctttgaaagtgaagaaggcacgttaggacagcag
caatacctggctcggctacgtgagctccagaatgcttcagagaccagccttgtcaatttt
ccaaaatccttaccagaatcaggtgcttccaatcagttaacagctaatgctaatggagtg
atagtcgacagccagcctgtagtcaaaaagaggagaggaaggaggaagaatgtagaagga
gttgacatcctctttataaatagaaataaaccacctaatcatgttagtccaggcattaac
acctcgcaagttgctccagtaataaacccaacacttacttatgctcagtcccaaggtcta
cttgatgcagaaagcccagttcctgtcattaacctgaaagatggaacaaggcttgcaggg
gatgatgcaccaaaaaggaaggatttagaaaaatggcttaaggaacatcctggttatgtt
gaagatttaggagcttttattcctagaatgcagcttcatgatgggaggcccaaacaaaaa
agacaccgttgtcgaaaccctaataaactggatgttaatagtctcactggtgaagaacgt
gttcagctgatcaatagaagaaatgctagaaaggtgggaggtgcttttgctccaccactg
aaggacttgtgcagattcttgaaagaaaatcctgagtatggagtagctcctgaatgggga
gatgttgtgaaacagtctggatttcttcctgaaggtatgtttgaccgtattctcactggg
cctgttgtacgagaagaagtaagcaggagggggagacggcctaaaagtgagattgccaag
gcaacagctgcagcagcagctgccacagcagcaaatgtttcggtcaaccctttgctagct
aatggattacttccaggagtggatctatctactcttcaggccttacaacaaaacctgcaa
aacttgcaatcactgcaagtaacagcaggattaatgggaatgcctgctggactaactact
ggaggagaagctaagaatatggctgccatgttccccatgctactgtcaggaatggctgga
ttaccaaacttgctgggtatgggaggactcctaacaaagtctacagaatctgtttcagag
gagaaaaagggaaatgactcaaaagagccagatgtaaagaaagaaaggacagaaaaccaa
catgcaaataatggtggtgaagactctgtgtcaagttctccctctacgtcctctgctgct
gccaaccctttagctcttaacccgttacttttgtccaatatactttatccagggatgctt
ctcactccaggccttaatcttcatatcccagcattgtcccaatccaatatttttgatgta
cagaacactgaaaacaatgacacaggctcagccaaggctacagaggaaaaggaggagaat
tctaggattagagatcaggaagacaaagggggaacagagccaagttctcataatgaaaac
agcacagatgagggttcagagaaagcagatgcttcatctggatctgacagtacatcgtct
tcatctgaggattcagattctagtgatgaagactga
DBGET
integrated database retrieval system
