Emys orbicularis (European pond turtle): 135890302
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Entry
135890302 CDS
T11511
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob03013
Nucleocytoplasmic transport
eob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135890302 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
135890302 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eob03019
]
135890302 (THOC5)
03041 Spliceosome [BR:
eob03041
]
135890302 (THOC5)
Messenger RNA biogenesis [BR:
eob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
135890302 (THOC5)
Spliceosome [BR:
eob03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
135890302 (THOC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
135890302
NCBI-ProteinID:
XP_065273738
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All DBs
Position
16:2344514..2374272
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AA seq
683 aa
AA seq
DB search
MSSDSSKKRKPKVIRTDGAPQESKRSRADPDQDVKYYSEEAEVELRDPNKDYELYKQTCQ
ELQRLMAEIQDLKSKGSKDSAVAIEERRIQSCMHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSVDEFYKEAPPEISKPDITL
NEPHQQTLARLDWELEQRKRLAEKYKECLANKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQANAYGQACDKKLAVAIEGSVEEAKAL
YKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVTIDLKCKDDSVL
HLIFYYLMNLNVMTVKTKVTTATEMTTPISAGDLLSPGSLLNCLYPGDHGKRTPNPANQF
QFDKVGILTLSDYVTDLGHPYVWVQKLGGLHFPKDQPQPTVTADNSLSASHMEMTMKLLK
TRLQSRLALHKQFASLEHGIVPVSSECQHLFPSKVVSRLVKWAALPYEDYLELSYTKDVV
EAGLAEDTHLYYTALVERGTAKLQAAVVLNPGYSSMPPIFNLCLNWKGEKTNSNDDNIRA
MESEVNVCYKELCGPKPGYQLLTNQLQRLCVVLDVYLETESHDTSVEGPKEFPQEKMCLR
LVRGPNRMKPFKYNHPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgattcgagcaagaagaggaaacccaaggtcatccgcaccgatggggctccg
caggagagcaagcggagcagggctgaccctgaccaggatgtgaagtattacagtgaagag
gcagaggtggaactccgagatcccaacaaagactatgaactctacaagcaaacctgccag
gaacttcagaggctcatggcagaaatccaggatctgaagagcaaaggcagcaaagacagt
gctgttgcgatagaagagcgtcggatccagagctgcatgcacttcatgaccctgaagaaa
ctcaaccgtttggctcatattcgactaaagaaggggagagatcagacccatgaggcaaag
cagaaagtagacgcctatcacctgcaactccagaacctgttgtatgaggtgatgcatctg
cagaaggagatcaccaaatgcctggagtttaagtcaaaacatgaggagatcgatctagtg
agcgtggatgaattttacaaagaggctcctccagaaatcagcaagcctgacatcaccctc
aatgagccccaccaacagaccctggcccgcctcgactgggagctggagcagcgcaaaagg
ctggcggagaagtataaggagtgtctggccaacaaggagaagatcctgaaggagatagaa
gtgaagaaggaatatctgagcagcctccagccccggctcaacagcatcatgcaggcctcc
ctccctgtccaagagtatctcttcatgcctttcgaccaagcacataagcagtacgagacg
gctagacacttgccaccacctctctatgttctctttgtccaagccaatgcctatgggcag
gcctgtgataagaagctggctgtggcaattgaagggagtgtggaagaagccaaagccctc
tacaagccaccagaggactcccaagatgacgagagtgattctgatgctgaagaggagcag
accacgaagcgtcgccgccccacgctgggcgtgcagctggatgacaagcgcaaggagatg
ctgaagaggcacccactgtctgttaccattgacctcaagtgcaaagacgacagcgtgctc
cacctgatcttctactacctgatgaacctcaatgtcatgacggtgaaaaccaaggtgacc
actgctacggagatgaccacgcccatcagcgctggagatctgctgtctccaggctccctg
ctgaactgcctgtatcctggggatcacgggaagagaactccaaatccagccaaccagttc
cagttcgataaagtcggcatcctgaccctgagtgattacgtgacagacctggggcacccc
tacgtgtgggtgcagaagctgggtggcctgcatttccccaaagatcagcctcagcccaca
gtgaccgcagataactcgctgagtgccagccacatggagatgactatgaagttgctcaag
acgaggctgcagtcccgcctggctctccacaagcagtttgcttcacttgagcatggcatc
gtgccggtctccagtgagtgccagcatctcttcccttccaaggtcgtgtcgcgcttggtg
aagtgggctgcgctcccctacgaggattacctggagctgtcctacaccaaagacgtcgtg
gaggctggcttggctgaagacactcacctctattatacggcgctggtagagagagggaca
gccaaactccaggcagctgtcgtgctgaatccaggctactcttccatgccacccatcttt
aacctgtgtctgaactggaaaggggagaaaaccaatagcaacgatgacaacattcgggca
atggagagcgaggtcaacgtgtgctacaaggagctgtgtgggccaaagcctggctaccag
ctcctgaccaatcagctgcagcgcttgtgcgtcgtgctggacgtctacctggaaacagag
tcccacgacaccagcgtggaagggcccaaggagttcccccaggagaagatgtgcctgcgt
cttgtcagggggcccaaccggatgaagccattcaagtacaaccatcctcaggggttcttc
agtcaccgctga
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