Emys orbicularis (European pond turtle): 135890593
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Entry
135890593 CDS
T11511
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
eob Emys orbicularis (European pond turtle)
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eob03009
]
135890593 (DDX55)
Enzymes [BR:
eob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135890593 (DDX55)
Ribosome biogenesis [BR:
eob03009
]
Eukaryotic type
Pre-60S particles
Helicases
135890593 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
CTT_SPB4
SBF_like
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
135890593
NCBI-ProteinID:
XP_065274074
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Position
16:complement(25450434..25464465)
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AA seq
595 aa
AA seq
DB search
MESVTEGRWESLPVTLSPGVLQTLRELGFPHMTPVQSATIPLFMNNKDIAAEAVTGSGKT
LAFVIPIVEILLRREEKLKKMQVGAIVITPTRELAVQIDEVLSHFTKHFPQFSQILLIGG
RNPIEDIEKFKEHGGNIIIATPGRLEDMFRRKADGLDLASCVKSLDVLVLDEADRLLDMG
FEASLNTILDFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQKTPT
RLENYYMICKADEKFNQLVHFLRQHKQEKHLVFFSTCACVEYYGKALESLVKNVKIMCIH
GKMKHKRNKIFTEFRKLPSGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTA
RIGHLGSALVFLLPMEESYVNFLSINQKCPMQEMKPLKNVVDVLPKLKTLALADRAMFEK
GMKAFVSCVQAYAKHECNLIFRIKDLDFASFARGFALLRMPKMPELKGKCFSDFVPVSID
TDSIPFKDKNREKQRQKLLEQQRKERQENEGKRKFIRNKAWSKQKAKKEKKKKMTTKRRR
EEGSDIEDEEMEELLNDTQLLKRLKKGKISEEEFEKRLMSTERKVKAVVDSESED
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgtgaccgaggggaggtgggagtctctgcccgtcacgctcagcccgggcgtc
ctgcagaccctgcgggagctgggcttcccccacatgacccccgtgcagtctgcaactata
cctttgtttatgaacaataaagatattgctgcggaagcggtaacgggcagtggcaaaaca
ttagcttttgtaattcccatagtagaaattctcctcagacgggaagaaaagttaaagaaa
atgcaggttggagcgatagtcatcacacccacaagagagttagctgttcagattgatgaa
gtgctatcacatttcacaaaacacttcccccaatttagccagattcttttgattggtggt
aggaatccaatagaagatattgaaaagttcaaagaacatggtgggaacatcattatagcc
acaccgggtcgtctggaggatatgttcagaagaaaagcagatgggctggatttagcaagt
tgtgtgaaatcacttgatgtgctggtattggatgaagcagacagacttctagatatggga
ttcgaagcaagtttaaataccattctggactttttgcccaagcagagacgaacaggcctg
ttctcagcaactcagactcaagaagtagagaacctggtgagagcaggtctccgaaatcct
gtccgcatctcagtgaaagagaagggagtggcagcaagtagcactcagaaaacacccaca
cggcttgaaaattactacatgatatgcaaagcagatgaaaaatttaatcagttggtgcat
tttcttcgacaacacaagcaggaaaaacatctggtctttttcagtacctgtgcctgtgtg
gaatattatgggaaagctctggaatccttagttaaaaatgtgaaaataatgtgcattcat
gggaaaatgaaacataaacgtaacaagatttttaccgagtttcggaaactcccaagtggc
attttagtttgcactgatgtgatggcccgtggcatagacattcccgaagtaaactgggtt
ttacagtatgatccacctagcagtgcaagtgcctttgtgcatcgctgcggtcgaacagct
cgaattggccatttaggcagtgcgcttgtgtttttgcttcccatggaagaatcttacgta
aattttctctcaataaaccaaaagtgtcccatgcaggaaatgaaaccactgaaaaatgtg
gtagatgttcttccaaaactgaagactctggctctggctgacagagccatgtttgagaaa
gggatgaaagcatttgtatcttgtgtgcaggcctatgccaaacatgagtgcaatcttatc
ttccgaataaaagatctggacttcgctagttttgctcgaggttttgccctgctgagaatg
ccaaagatgcctgaactaaaaggaaagtgtttttcagactttgttcctgtcagtattgat
acagactccattccgttcaaagataaaaatagagaaaaacaaaggcaaaagctgttagag
caacaaagaaaggaaagacaagaaaacgaaggaaaaagaaaattcataaggaataaagcg
tggtcaaagcagaaagccaaaaaggagaagaagaagaaaatgacaacgaaaaggagaaga
gaagagggctctgatattgaagatgaggaaatggaggagctgctgaatgacacacaactt
ttgaaaaggttaaaaaagggtaaaattagtgaggaagagttcgagaagaggctgatgagc
actgagagaaaagtcaaagctgtggttgactcagagtctgaagattga
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