Emys orbicularis (European pond turtle): 135890908
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Entry
135890908 CDS
T11511
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
135890908 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eob02000
]
135890908 (SLC6A4)
Transporters [BR:
eob02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
135890908 (SLC6A4)
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Motif
Pfam:
SNF
5HT_transport_N
PRONE
DUF8620
Motif
Other DBs
NCBI-GeneID:
135890908
NCBI-ProteinID:
XP_065274455
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Position
17:complement(3220255..3241389)
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AA seq
669 aa
AA seq
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MKKSSSNETQTLTSKKELLDCTEGEDCQENGLLVKNPKSALQLVEDGNKVHPSQGDKGEA
GQISNGYSVVQSPVTCKGIGDGEDVQCTAPAATTTTTTTTSTTCGVEAQPQLLELEERET
WSKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIPYTIMAIFGGIPLFYMELALGQ
YHRNGCISIWRKICPIFKGIGFTICIIAFYIASYYNTIMAWALYYLISSFTSELPWTSCK
NAWNTVNCTNYFTNASITWTPHSISPAEEFYTRHILQVQRSKGLDDLGGISWQLTLCLLL
IFTIVYFSIWKGVKTSGKVVWVTATFPYIILFILLIRGATLPGAWRGVVFYLKPDWQKLL
ATEVWVDAAAQIFFSLGPGFGVLLAFASYNKFHNNCYQDALVTSTVNCMTSFVSGFVIFT
VLGYMAEMRNEEVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMLLTLGLDSTFA
GLEGVITAVLDEFPHVWGKRREWFVLGLIIACFLGSLTTLTFGGAYVVKLFEEYATGPAV
LTVVFLESIAVAWFYGINQFCSDMKEMLGFTPGWYWRLCWVAISPIFLLFIICSFMSSPP
DLRLFDYNYPYWTTIVGYCIGTSSVICIPIYMAYRLIITPGTLKERILKSITPETATEIP
FGDIRMNAV
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtcatccagcaatgagacccagactcttacttctaagaaagagctcttggac
tgtacggaaggtgaagattgccaagagaatggactcctggtcaagaaccctaaatccgcc
ctgcagctggtggaggatgggaataaggtccaccccagccagggagataaaggggaagca
ggtcagatctccaatggctactcagtggttcagagcccagttacttgcaaaggaatagga
gatggggaagatgtccagtgcacggccccagcagccaccactaccaccaccaccaccact
tccaccacttgtggggtggaggctcaaccacagctgctggagctggaggaaagagagacc
tggagtaaaaaaatggactttcttctctctgtcattggctatgcagtggatctgggcaat
gtatggcgatttccctatatatgctaccaaaatggaggaggagcgtttctcatcccgtac
accatcatggccatctttggaggcatccccctcttttacatggagctagcactgggacag
taccacaggaatgggtgtatctcaatttggaggaaaatttgtcctattttcaaaggaatt
ggctttactatctgcataatagctttctacatagcctcttactacaataccatcatggct
tgggccctctactacctcatttcatccttcacgtcagaactgccatggaccagctgcaaa
aatgcttggaacaccgtcaactgcaccaactacttcaccaatgccagcattacctggacc
ccacactccatctcccctgcagaagaattttatacccgccacattctacaggtgcaaaga
tccaaagggctggatgatctgggaggcattagctggcaactgacactctgcttattgttg
atattcactattgtgtacttcagcatctggaaaggggtcaaaacatctggcaaggtggtg
tgggtgactgccacgttcccttacatcatactctttatcctgttaatacgaggggccaca
ctgcctggagcctggaggggggttgtcttctacctgaagcctgactggcagaaactcctg
gccactgaggtctgggtggatgctgcagctcagattttcttctctcttggtccaggtttt
ggggtcctactagcttttgccagctacaacaaattccacaacaactgctaccaggatgca
ttggttaccagtacggtgaactgcatgactagttttgtgtctggatttgtcattttcact
gtgcttggatatatggctgaaatgaggaatgaagaggtgtcggaggttgctaaagatact
gggcccagccttctcttcattacctacgcagaggccattgcaaacatgccggcttcgact
ttttttgctatcatatttttcttgatgttactcactctgggattagacagcacgtttgca
gggctggagggggtgatcactgcggtgctggatgaattcccacatgtttggggaaagcgc
agggaatggtttgtccttggtctgatcatcgcttgcttcctggggtcattaacaaccctg
acatttggtggtgcatacgtagtgaagctgtttgaagaatatgctacaggccctgctgtc
ctaacggtggtgtttctagaatccattgcggtggcctggttctatggcatcaaccagttt
tgcagtgacatgaaggaaatgctgggcttcactccaggctggtactggcgactctgctgg
gtagcaatcagccccatcttccttttgttcatcatttgcagttttatgtccagccctcct
gatctacggctttttgactataactatccctactggaccactatagtgggttactgcata
ggaacctcctctgttatctgcattccaatctacatggcttatcggttgataatcacccca
ggaacacttaaagagcgtattctaaaaagcattaccccggagacagccacagaaattccc
tttggggacatccgcatgaatgcagtttag
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