Emys orbicularis (European pond turtle): 135891698
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Entry
135891698 CDS
T11511
Symbol
VPS36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36 isoform X1
KO
K12190
ESCRT-II complex subunit VPS36
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135891698 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eob04131
]
135891698 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eob04147
]
135891698 (VPS36)
Membrane trafficking [BR:
eob04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
135891698 (VPS36)
Exosome [BR:
eob04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
135891698 (VPS36)
Exosomal proteins of colorectal cancer cells
135891698 (VPS36)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
GRAM
BBL5
Xre-like-HTH
DUF1351
V-ATPase_G_2
Motif
Other DBs
NCBI-GeneID:
135891698
NCBI-ProteinID:
XP_065275404
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All DBs
Position
1:313696000..313718509
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AA seq
386 aa
AA seq
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MDRFAWASGLLEMNETLVIQQRGVWLYDGEEKVKFDTGVLLLSTHRLIWRDLKNHECCIA
IPLSQIVFIEEQAAGIGKSAKIVVHLHPAPSNKEPGPFQSSKYSYIKLSFKEHGQIEFYR
RLSEEMTQRRWENMPVSQTIQINRGPQAGRIRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMEKAKEMVELSKSIANKIKEKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTH
YHMQLAKQLAGILQAPLEERGGIMSLTEVYCLVNRARGLELLSPEDLVNACKMLVALKLP
LRLRLFDSGVMVIELQSHNEEEMVASALETVSEKGSLTAEEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFMTQS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaccggttcgcgtgggccagcggcctgctggagatgaacgagaccctggtgatccag
cagcgcggggtgtggctctacgacggggaggagaaggtaaagtttgatactggggtattg
ctacttagcacacaccgactgatctggagagatctgaaaaatcatgaatgctgcattgct
atccctctttctcagattgtcttcattgaagagcaagcagctgggataggaaaaagtgcc
aaaatagtggttcatcttcatccagctccttcaaacaaagagcctggcccgttccagagc
agcaaatattcctacatcaaactttctttcaaagaacatggtcagattgagttctataga
cggttgtcagaagaaatgacacagaggagatgggagaacatgcctgtgtctcagaccatt
caaattaacaggggtccacaggcaggaagaataagggctgtaggaattgtaggtattgag
aggaaattagaagagaagagaaaagagactgacaaaaacatttctgaggcttttgaagat
ctcagcaagttaatggaaaaggctaaggaaatggtggagttatccaaatcaatagctaac
aaaattaaagaaaaacaaggtgacatcacggaagatgagactatcaggtttaagtcttat
ctgttgagcatgggtatagctaacccagttaccagggaaacacatggatctggcacacat
taccatatgcaactggcaaaacaactagctggaatactacaggcaccactagaggaacga
gggggaataatgtcacttacagaggtgtattgtctagtaaaccgggctcggggattggag
ttgctctctccagaagatttagtaaatgcttgtaagatgctagtggcactgaaattaccc
ctaaggcttcgtctatttgacagcggtgtaatggtgattgagctccagtcccacaatgaa
gaggaaatggtggcttctgctttagagacagtatctgaaaagggttctcttacagctgaa
gagtttgccaagcttgtggggatgtctgttcttttagccaaagagaggctgcttctagct
gaaaagatgggccatctttgcagagatgattcagtggaaggcttgagattctatccaaac
ttatttatgacacaaagttaa
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