Emys orbicularis (European pond turtle): 135892045
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Entry
135892045 CDS
T11511
Symbol
HNRNPA1
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1 isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135892045 (HNRNPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eob03019
]
135892045 (HNRNPA1)
03041 Spliceosome [BR:
eob03041
]
135892045 (HNRNPA1)
Messenger RNA biogenesis [BR:
eob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
135892045 (HNRNPA1)
mRNA cycle factors
Common to processing body (P body) and stress granule
135892045 (HNRNPA1)
Spliceosome [BR:
eob03041
]
Common components
Common spliceosomal components
hnRNP proteins
135892045 (HNRNPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
135892045
NCBI-ProteinID:
XP_065275806
LinkDB
All DBs
Position
19:complement(17233318..17243164)
Genome browser
AA seq
384 aa
AA seq
DB search
MSKSESPKEPEQLRKLFIGGLSFETTDESLRGHFEQWGTLTDCVVMRDPNTKRSRGFGFV
TYSTVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHH
LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA
LSKQEMASASSSQRGRSGSGNFSGGGGRGGGFGGNDNFNRGSNFSGRGGFGGSRGGGYGG
SGDGYNGFSNEGYGGGGGGGPSYSGGSRGYGGSGNYDGYNNGGGGGFGSGSGGSSFGGGG
NYNDFGSYNNQSSNFGPMKGGNFGGRSSGPYSSGGGVALGGLLSERGHPNKSLRTTAITP
SPIALSGGYGGSSSGGSYGGGRRF
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagtccgagtcccctaaggaacctgagcagctgcgcaagctcttcatcggtggc
ctgagcttcgagacaacagatgagagccttcgtggccacttcgagcaatggggcacactc
accgattgcgtggtaatgagagatccaaataccaagcgctccaggggctttgggtttgtt
acatactctacagtagaagaggttgatgctgccatgaatgctagaccgcacaaagttgat
ggcagagttgttgaaccaaagagggccgtatccagagaggactctcagaggcctggagct
cacctgacagtgaagaaaatctttgttggtgggattaaggaagacacagaggagcaccac
ctgagagactactttgaacagtatggcaaaattgaagtgattgagatcatgacagaccgt
ggcagtggcaagaagagaggctttgcattcgtcacctttgatgaccacgactccgtggac
aagattgttattcagaaatatcacactgtgaatggccacaactgcgaagtgaggaaagca
ctgtcaaagcaagaaatggccagcgcttcatccagccaaagaggtcgcagtggctctggg
aacttcagtggtggcggcggccgtggaggtggatttggtggaaatgacaactttaaccgt
ggcagcaacttcagtggtcgtggtgggtttggtggcagccgcggtggtggctatggaggc
agtggagacggctataatggatttagcaatgagggttatggtggtggcggcggcggtggc
cctagctactctggaggaagcagaggctacggtggcagtggcaactatgacggctataac
aacggaggtggtggcggctttggcagtggcagtggaggaagcagctttggaggtggcgga
aactacaatgactttggcagttacaacaaccaatcttcaaactttggccctatgaaagga
gggaacttcggaggcaggagctctggtccatacagcagtggtgggggggtcgcactcgga
ggcttgctatctgaaaggggtcacccgaacaaaagtttgagaaccactgctataacgcca
tctccaattgctctctcaggtggctacggtggctccagtagtggcggtagttatggaggt
gggagaaggttttaa
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