Emys orbicularis (European pond turtle): 135893320
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Entry
135893320 CDS
T11511
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob03013
Nucleocytoplasmic transport
eob03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135893320
03015 mRNA surveillance pathway
135893320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eob03019
]
135893320
Enzymes [BR:
eob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135893320
Messenger RNA biogenesis [BR:
eob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
135893320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
135893320
NCBI-ProteinID:
XP_065277186
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All DBs
Position
22:complement(9044109..9067775)
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AA seq
507 aa
AA seq
DB search
MSPFPRRRHCGYWSRALRAPSPAAITRTMATDSWALAVDEQEAAAESLSNLHLKEEKTKP
SSNGAVVKTDDNAEKTEDEEKEDRAAQSLLNKLIRSNLVDTTNQVEVLQRDPTSPLYSVK
SFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAM
LSRVEPGNKYPQCLCLSPTYELALQTGKVIEQMGKFHPELSLAYAVRGNKLERGQKISEQ
IVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRDCQMLL
FSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNRDEKFQALCNIYGAIT
IAQAMIFCHTRKTAGWLAGELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNV
CARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNIL
NRIQEHFNKKIEKLDTDDLDEIEKIAN
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctttccctcggcggcgccattgcggctactggtcccgagccctgcgagctccc
agccctgccgccatcacccggaccatggccaccgactcctgggctctggcggtggacgag
caggaagcggccgccgagtcgttgagcaacttgcacctgaaggaggagaaaactaagcca
agctccaatggtgctgttgtcaagacagatgacaatgcagagaaaacagaagatgaggaa
aaagaggacagagctgcccaatccttgttaaacaagctgattcgcagtaatctggtggac
acaacaaaccaagtggaggtgctgcagagggatcctacatcacctctctactctgtgaag
tcttttgaggagctgcgactgaaaccccagctcctgcagggtgtctatgccatgggcttc
aacagaccctcgaaaatacaggagaatgctctgcccatgatgcttgctgaacccccacag
aacctgattgcacagtctcagtctggtactggtaagacagctgccttcgtcttggccatg
ctcagtcgagttgaacccgggaacaagtatccacagtgtttgtgcctttccccaacatat
gagctggcacttcaaacaggaaaagtaattgaacagatgggaaagtttcatccggagcta
agtcttgcatatgctgtccgaggcaataaattggagagaggtcagaagatctctgagcag
attgtaattggcactccgggcactgtcctggactggtgctccaaactgaaattcatagac
cccaagaagattaaagtgtttgtcctggatgaggctgatgtgatgatagcaacccagggc
catcaagatcagagcatccgcattcagagaatgctccccagagattgccagatgctccta
ttttctgccacctttgaagattctgtatggaaatttgcccaaaaagttgttcccgacccc
aacatcatcaaactgaagcgagaggaggagacgctggacaccattaagcaatactatgtt
ctgtgtaataatcgagatgagaagttccaggctctctgtaatatatatggagccatcacc
attgcccaggccatgatcttctgtcatactcgtaaaacagcgggctggctggcaggagag
ctgtcgaaagaaggtcaccaggtggcattgctaagtggtgagatgatggtggaacaaaga
gctgcagtgatcgagcgtttcagagagggcaaagagaaagtgctggtgaccacaaatgtc
tgtgccagagggattgatgtagagcaggtctctgtggttatcaactttgaccttcctgtg
gataaagatggcaacccagataatgagacttatctgcatcggattgggcgtacaggtcgt
tttggcaagcgaggactggctgttaacatggtagacagcaagcacagcatgaatattctc
aacagaattcaggaacatttcaacaaaaagatagaaaaactggatactgacgacttggat
gaaattgagaaaatagccaactga
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