Emys orbicularis (European pond turtle): 135894972
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Entry
135894972 CDS
T11511
Symbol
LRRC4B
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob04514
Cell adhesion molecule (CAM) interaction
eob04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
135894972 (LRRC4B)
04517 IgSF CAM signaling
135894972 (LRRC4B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
eob04515
]
135894972 (LRRC4B)
Cell adhesion molecules [BR:
eob04515
]
Immunoglobulin superfamily
NGL family
135894972 (LRRC4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
LRR_9
ig
V-set
Ig_2
LRRNT
LRR_At5g56370
LRR_EndoS
LRR_RPS2
DUF7617
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
135894972
NCBI-ProteinID:
XP_065279099
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All DBs
Position
21:complement(749068..751005)
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AA seq
645 aa
AA seq
DB search
MAAPRCCSRRGPPPPRPSRMPWKSVLLLGLWLPSLAWAGASPTSCPAACSCSNQASRVIC
TRRELVEVPESISINTRYLNLQENNIQLIKTDTFKHLRHLEILQLSKNLIRKIEVGAFNG
LPNLNTLELFDNRLATVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGEL
KKLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDMIRPGSFQGL
TSLRKLWLMHAQVSTIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNP
WHCNCDVLWLSWWLKETVPNNTTCCARCHAPANLKGRYIGELDQSHFTCYAPVIVEPPTD
LNVTEGMAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTG
QYTCMVTNSAGNTTASATLNVSAVDPAATGYTYFTTVTVETLETAQEDALPTKKEPGPTP
AVGWDVTYSTTSLTPRSTRSTEKPYTVPITDAAEGGMKDLDDVMKTTKIIIGCFVAITFM
AAVMLIVFYKLRKQHQFHKHHGPTRTIEIINVEDELPAAAGAPGDSHLALPALEHDHLNH
YAAFKAHYNNNAGALACAKNPLLNSIHEPLLFKSSSKENVQETQI
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggctgccccccgttgctgctcccggagggggccgccacctccccgtccctctaggatg
ccctggaagtcggtcctgctgctggggctttggttgccttcgctggcgtgggccggagct
tcgcccacttcctgcccggccgcctgttcctgcagcaaccaggccagccgggtgatctgc
acgcgccgggagctggtggaggtgccggagagcatctccatcaacacgcggtacctcaac
ctgcaggagaacaacatccagctcatcaagaccgacaccttcaagcacctgcggcacctg
gagatcctgcagctgagcaagaacctgatccgcaagatcgaggtgggcgccttcaacggc
ctgcccaacctcaacacgctggagctcttcgacaaccgcctggccacggtgcccacccag
gccttcgagtacctctccaagctgcgggagctctggctgcggaacaaccccatcgagagc
atcccgtcctacgccttcaaccgggtgccctccctgcgccgcctggacctgggcgagctc
aagaagctggagtatatctccgaggcggccttcgaagggctggtgaacctgcggtacctg
aacctgggcatgtgcaacctcaaggacatccccaacctgacggcgctggtgcggctggag
gagctggagctgtcgggcaaccggctggacatgatccgccccggctccttccagggcctc
accagcctgcgcaagctgtggctgatgcacgcccaggtgtccaccatcgagcgcaacgcc
ttcgacgacctcaagtcgctggaggagctgaacctgtcccacaacaacctcatgtcgctg
ccccacgacctcttcacccccttgcaccggctggagcgggtgcacctcaaccacaacccc
tggcattgcaactgtgatgtcctctggctcagctggtggctgaaggagacggtgcccaac
aacaccacctgctgcgcccgctgccacgccccggccaacctcaaggggcgttacatcggc
gagctggaccagagccacttcacctgctacgcaccggtcatcgtcgagccgcccaccgac
ctcaacgtgacggaggggatggcggcggagctgaagtgccggacgggcacctccatgacc
tcggtcaactggctgacgcccaatgggacgctgatgacgcacggctcgtaccgggtgcgg
atttccgtcttgcacgatggcacgctcaacttcaccaatgtgacggtgcaggacacgggg
cagtacacctgcatggtgaccaactcggccggcaacaccacggcgtcggccaccctcaac
gtctcggccgtggacccggccgccaccggctacacctacttcaccaccgtcaccgtggag
acgctggagacggcccaggaggacgcgctgcccaccaagaaggagccgggccccacgcct
gctgtgggctgggacgtgacctactccaccacctccttgacgccccgctccacccgctcc
acggagaagccctacaccgtgcccatcaccgacgcggccgagggcggcatgaaggatctg
gacgacgtgatgaagaccaccaagatcatcatcggctgcttcgtggccatcaccttcatg
gcggccgtcatgctgatcgtcttctacaagctgcgcaagcagcaccagttccacaagcac
cacggccccacccgcaccatcgagatcatcaacgtggaggacgagctgccggccgcggcc
ggcgcccccggcgacagccacctggccctgccggccctggagcacgaccacctcaaccac
tacgcggccttcaaggcccactacaacaacaacgcgggggccctggcctgcgccaagaac
ccgctactgaactctatccacgaacctctgctgttcaagagcagctcaaaggagaacgtg
caggagacgcagatctga
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