Escherichia coli O7 K1 CE10: CE10_3692
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Entry
CE10_3692 CDS
T01999
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
eoc
Escherichia coli O7:K1 CE10
Pathway
eoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CE10_3692 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eoc03019
]
CE10_3692 (deaD)
03009 Ribosome biogenesis [BR:
eoc03009
]
CE10_3692 (deaD)
Enzymes [BR:
eoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CE10_3692 (deaD)
Messenger RNA biogenesis [BR:
eoc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CE10_3692 (deaD)
Ribosome biogenesis [BR:
eoc03009
]
Prokaryotic type
rRNA helicases
CE10_3692 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
DeaD_C
ResIII
CMS1
AAA_22
Cas3-like_C_2
DRTGG
Motif
Other DBs
NCBI-ProteinID:
AEQ14412
LinkDB
All DBs
Position
complement(3763598..3765487)
Genome browser
AA seq
629 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAF
SLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLEQYRALLSKIQPTAEGEELD
LETLAAALLKMAQGERTLIVPPDAPMRPKREFRDRDDRGPRDRNDRGPRGDREDRPRRER
RDVGDMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPGE
VLQHFTRTRILNKPMNMQLLGDAQPHTGGERRGGGRGFGGERREGGRNFSGERREGGRGD
GRRFSGERREGRAPRRDDSTGRRRFGGDA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcc
cttaacgatctgggttacgaaaaaccatctccaattcaggcagagtgtattccacatctg
ctgaatggccgcgacgttctgggtatggcccagacggggagcggaaaaactgcagcattc
tctttacctctgctgcagaatcttgatcctgagctgaaagcaccacagattctggtgctg
gcaccgacccgcgaactagcggtacaggttgctgaagcaatgacggatttctctaaacac
atgcgcggcgtaaacgtggttgccctgtacggcggccaacgttatgacgtgcaattacgc
gccctgcgtcaggggccgcagatcgttgtcggtactccgggccgtctgctggaccacctg
aaacgtggcactctggacctctctaaactgagcggtctggttctggatgaagctgacgaa
atgctgcgcatgggcttcatcgaagacgttgaaaccattatggcgcagatcccggaaggt
catcagaccgctctgttctctgcaaccatgccggaagcgattcgtcgcattacccgccgc
tttatgaaagagccgcaggaagtgcgcattcagtccagcgtgacgacccgtcctgacatc
agccagagctactggactgtctggggtatgcgtaaaaacgaagcactggtacgtttcctg
gaagcggaagattttgatgcggcgattatcttcgttcgtaccaaaaacgcgactctggaa
gtggcagaagctcttgagcgtaacggctacaacagcgccgcgctgaacggtgacatgaac
caggcgctgcgtgagcagacactggaacgactgaaagatggtcgtctggacatcctgatt
gcgaccgacgttgcggcccgtggcctggacgttgagcgtatcagcctggtagttaactac
gatatcccgatggattctgagtcttacgttcaccgtatcggtcgtactggtcgtgcgggc
cgtgctggccgtgcgctgctgttcgttgagaaccgtgagcgtcgtctgctgcgtaacatt
gaacgcaccatgaagctgaccattccggaagttgaactgccgaacgcagaactgctgggc
aaacgtcgtctggaaaaattcgccgctaaagtacagcagcagctggaaagcagcgatctg
gagcaataccgtgcactgctgagcaaaattcagccgacggcagaaggtgaagagctggat
ctcgaaactctggccgccgcactgctgaaaatggcacagggtgaacgtactctgattgtt
ccgccagatgcgccgatgcgtccgaaacgtgaattccgtgaccgtgatgaccgtggtccg
cgcgatcgtaacgaccgtggcccgcgtggtgaccgtgaagatcgtccgcgtcgtgaacgt
cgtgatgttggcgatatgcagctgtaccgcattgaagtgggccgcgatgatggtgttgaa
gttcgtcatatcgttggtgcgattgctaacgaaggcgacatcagcagccgttacattggt
aacatcaagctgtttgcttctcactccaccatcgaactgccgaaaggtatgccgggtgaa
gtgctgcaacactttacgcgcactcgcattctcaacaagccgatgaatatgcagttactg
ggcgatgcacagccgcatactggcggtgagcgtcgtggcggtggtcgtggtttcggtggc
gaacgtcgtgaaggcggtcgtaacttcagcggtgaacgccgtgaaggtggccgtggtgat
ggtcgtcgttttagcggcgaacgtcgtgaaggccgcgcaccgcgtcgtgatgactctacc
ggtcgtcgtcgtttcggtggtgatgcgtaa
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