Escherichia coli O7 K1 CE10: CE10_4472
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Entry
CE10_4472 CDS
T01999
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
eoc
Escherichia coli O7:K1 CE10
Pathway
eoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CE10_4472 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eoc03019
]
CE10_4472 (recQ)
03400 DNA repair and recombination proteins [BR:
eoc03400
]
CE10_4472 (recQ)
Enzymes [BR:
eoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CE10_4472 (recQ)
Messenger RNA biogenesis [BR:
eoc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CE10_4472 (recQ)
DNA repair and recombination proteins [BR:
eoc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CE10_4472 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AEQ15161
LinkDB
All DBs
Position
4557647..4559482
Genome browser
AA seq
611 aa
AA seq
DB search
MNVAQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQ
IPALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRL
LYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFM
ALTATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKS
GIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGM
GINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQG
QLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQI
ALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIH
LGLVTQNIAQHSALQLTEAARPVLRGESSLQLAVPRIVALKPKAMQKSFGGNYDRKLFAK
LRKLRKSIADESNVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMAL
IRAHVDGDDEE
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgtggcgcaggcggaagtgttgaatctggagtccggagctaaacaggttttacaa
gaaacctttggctaccaacagtttcgccccggccaggaagaaattatcgacactgtgctt
tccggccgcgattgcctcgtcgtcatgcccactggtggcggaaaatccctttgctatcaa
atccctgccttattgctaaacggccttaccgtggttgtttcaccgctgatttcgttgatg
aaagatcaggtggatcaactgcaagccaacggcgtggcggcggcgtgccttaactcgacg
caaacccgcgagcagcaacttgaagttatgacaggctgtcgcaccgggcaaatccgcctg
ctttatatcgcgccggaacgcctgatgctggataactttcttgagcatctggcgcactgg
aatccggtgttattagccgttgatgaagcgcactgtatctcccaatggggccacgatttc
cgcccggaatacgctgccctcggtcagctgcgtcagcggttcccgacgctgccgtttatg
gcgctgactgccacagccgatgacaccacgcgccaggatatcgtgcgcctgctggggctg
aacgatccgctgattcaaatcagcagttttgatcgcccgaatattcgctacatgctgatg
gagaaattcaaaccgctcgatcagttgatgcgctacgtgcaggaacaacgcggtaagtcc
ggcattatctactgcaacagccgggcgaaagtagaagacaccgctgcgcgcctgcaaagc
aagggaattagcgcggcggcctatcatgccgggctggaaaataatgtccgcgccgacgtg
caggaaaaatttcagcgcgatgacctgcaaattgtggtggcgaccgtggcgtttggcatg
ggcatcaacaagcctaacgtccgcttcgtggtccactttgatattccgcgcaatatcgaa
tcctattatcaggaaaccggacgcgccgggcgtgatggcctgcccgcggaagcgatgctg
ttttacgatccggccgatatggcgtggctacgccgttgtctggaagagaagccgcagggg
caattgcaggatatcgagcgccataaactcaatgcgatgggcgcgtttgccgaagcgcaa
acttgccgtcgtctggtgctgctgaactactttggcgaagggcggcaggagccgtgcggg
aactgcgatatctgcctcgatccgccgaaacaatacgatggttcaaccgatgctcagatt
gccctttccaccattggtcgtgtgaatcagcggtttgggatgggttatgtggtggaagtg
attcgtggcgctaataaccagcgtatccgcgactatggtcatgacaaactgaaagtctat
ggcatgggccgtgataaaagccatgaacattgggtgagcgtgatccgccagctgattcac
cttggcctggtgacgcaaaatattgcccagcattctgccctacaactgacagaggctgcg
cgtccggtgctgcgcggcgaatcctctttgcaacttgccgtgccgcgtatcgtggcgctc
aaaccgaaagcgatgcagaaatcgttcggcggcaactatgatcgcaaactgttcgccaaa
ttacgcaaactgcgtaaatcgattgccgatgaaagcaatgtcccgccgtacgtggtgttt
aacgacgcaaccttgattgagatggcggaacagatgccgatcactgccagcgaaatgctc
agcgttaacggcgttgggatgcgcaagctggaacgctttggcaaaccgtttatggcgctg
attcgtgcgcatgtcgatggcgacgacgaagagtag
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