Endosymbiont of Sipalinus gigas: NARSGI1_00400
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Entry
NARSGI1_00400 CDS
T06000
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
eof
Endosymbiont of Sipalinus gigas
Pathway
eof03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NARSGI1_00400 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eof03021
]
NARSGI1_00400 (rho)
03019 Messenger RNA biogenesis [BR:
eof03019
]
NARSGI1_00400 (rho)
Transcription machinery [BR:
eof03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NARSGI1_00400 (rho)
Messenger RNA biogenesis [BR:
eof03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NARSGI1_00400 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
OB_RNB
NACHT
AAA_25
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
BBA85193
UniProt:
A0A2Z5THC9
LinkDB
All DBs
Position
complement(43337..44599)
Genome browser
AA seq
420 aa
AA seq
DB search
MNLTELKNIKISDLISIGEKMDLINLARMRKQDIIFNILKQHARIGEDIFGDGVLEILQD
GFGFLRSVNSSYLAGPDDIYVSPSQIKKFNLRTGDTISGKIRPPKDNEKYFALLKINQIN
FDSPENSKNKILFENLTPLHANIRLKMEKGNGTIDDLTSRVLDLTSPIGKGQRGLIVAPP
KAGKTVLLQNIAKSIYSNYPECVLIILLIDERPEEVTEMKYLINSIDVIASTFDEPYSRH
IQISEMVIEKAKRLVEHKKDVIILLDSITRLTRAYNSVMPSSGKILTGGIDSNALNRPKR
FFGAARNIQEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKISEKKIFPAID
YNKSGTRKEELLISNEELSKIWILRKIINSMNEIDAIEFLINKLSITKNNSEFFNLMKKK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaacagaattaaaaaatataaaaatatctgatttaatatctataggagaaaaa
atggatttaataaatttagctagaatgagaaaacaagatattatatttaatattttaaaa
caacatgcaagaataggtgaagatatatttggagatggagtattagaaatattgcaagat
ggatttggttttcttagatcagtaaatagttcttatctagccggtcctgatgatatatat
gtttctccaagtcaaataaaaaaatttaatttaagaactggagatactatatcaggaaag
attagacctccaaaagataatgaaaaatattttgctttattaaaaataaatcaaataaat
tttgatagtcctgaaaattcaaaaaataaaatattatttgaaaatttaactccattacat
gctaatattagattaaaaatggaaaagggtaatggaactatcgatgatttaacatcaaga
gttttagatttaacttctcctataggaaaaggtcaaagaggattaatagtagctccacct
aaagctggaaaaactgtattactacaaaatatagctaaaagtatatatagtaattatcca
gaatgtgttttaataatattacttatagatgaaagaccagaagaagttactgaaatgaaa
tatttaataaatagtatagatgttatcgcttctacttttgacgaaccgtattctagacat
attcaaatatctgaaatggttattgaaaaagctaaaagattagttgaacataaaaaagat
gtaataatattattagattctataactagattaactagagcatataattcagttatgcct
tcatcgggtaaaatattaactggaggtatagattctaatgctttaaatagacctaaaagg
ttttttggagcagctagaaatattcaagaaggaggaagtttaacaattatagctacagct
ttaatagatactgggtcaaaaatggatgaagttatatatgaagaatttaaagggactggt
aatatggagcttcatttatcaagaaaaatatcagaaaaaaaaatatttccagcaatagat
tataataaatctggaacaagaaaagaagaattacttataagtaatgaagaattgtctaaa
atatggatattaagaaaaataattaattcaatgaatgaaatagatgctatagaattttta
ataaataaattatctataactaaaaataatagtgaattttttaatcttatgaaaaaaaaa
taa
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