Escherichia coli O103 H2 12009 (EHEC): ECO103_0723
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Entry
ECO103_0723 CDS
T01096
Symbol
farR
Name
(GenBank) putative transcriptional regulator
KO
K11922
GntR family transcriptional regulator, mannosyl-D-glycerate transport/metabolism system repressor
Organism
eoh
Escherichia coli O103:H2 12009 (EHEC)
Brite
KEGG Orthology (KO) [BR:
eoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eoh03000
]
ECO103_0723 (farR)
Transcription factors [BR:
eoh03000
]
Prokaryotic type
Helix-turn-helix
GntR family
ECO103_0723 (farR)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
DnaD_N
HTH_DeoR
DUF6070
HVO_A0261_N
HTH_11
HTH_Crp_2
Rrf2
HTH_41
bpX5
HTH_CodY
Motif
Other DBs
NCBI-ProteinID:
BAI29580
LinkDB
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Position
complement(798259..798981)
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AA seq
240 aa
AA seq
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MGHKPLYRQIADRIREQIARGELKPGDALPTESALQTEFGVSRVTVRQALRQLVEQQILE
SIQGSGTYVKEERVNYDIFQLTSFDEKLSDRHVDTHSEVLIFEVIPADDFLQQQLQITAQ
DRVWHVKRVRYRKQKPMALEETWMPLALFPDLTWQVMENSKYHFIEEVKKMVIDRSEQEI
IPLMPTEEMSRLLNISQTKPILEKVSRGYLVDGRVFEYSRNAFNTDDYKFTLIAQRKSSR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgggacacaagcccttataccggcagattgccgatcgcattcgtgaacaaattgcgcgt
ggcgagcttaaacctggcgatgcgttacctaccgaatcggcattacaaacagagtttggc
gtcagccgggttacggtgcgtcaggctttgcgccagttagtcgagcaacagatcctcgaa
agcattcagggcagcgggacttacgtcaaagaagagcgggtcaattacgatatttttcag
ttaaccagttttgatgaaaaactgtcggaccgtcacgtcgatacacacagtgaagtcctg
atatttgaagtgattccggctgacgattttcttcagcaacagctacaaatcaccgcgcag
gatcgtgtgtggcatgtgaagcgcgtgcgctatcgcaagcaaaagccaatggcgctggaa
gaaacctggatgccgcttgcgttgttcccggatctcacctggcaggtcatggaaaattca
aaatatcactttattgaagaagtgaagaaaatggttatcgatcgtagcgaacaggaaatc
attcctctgatgccaaccgaagagatgagccgtctgcttaatatcagccagacaaagccg
attcttgaaaaagtatcgcgtggatatttagttgatggtcgggtgtttgaatatagccgc
aacgcttttaataccgatgactataaatttaccctgatagcgcaacgaaaatcatcgcga
taa
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