KEGG   Escherichia coli O103 H2 12009 (EHEC): ECO103_1059
Entry
ECO103_1059       CDS       T01096                                 
Symbol
ycdC
Name
(GenBank) predicted DNA-binding transcriptional regulator
  KO
K09017  TetR/AcrR family transcriptional regulator
Organism
eoh  Escherichia coli O103:H2 12009 (EHEC)
Brite
KEGG Orthology (KO) [BR:eoh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:eoh03000]
    ECO103_1059 (ycdC)
Transcription factors [BR:eoh03000]
 Prokaryotic type
  Helix-turn-helix
   TetR/AcrR family
    ECO103_1059 (ycdC)
SSDB
Motif
Pfam: TetR_C_3 TetR_N TetR_C_29
Other DBs
NCBI-ProteinID: BAI29904
LinkDB
Position
1159344..1159982
AA seq 212 aa
MTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFP
SKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEML
AGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQV
EAVTGATLRDEIFFNQTVENVQRIIIEGIRPR
NT seq 639 nt   +upstreamnt  +downstreamnt
atgacgcaaggcgcagtgaaaacaacgggtaaacgttcgcgcgcagtaagcgcgaagaaa
aaagcgattcttagcgcagcactggacactttttcacaattcggttttcacggcacaagg
ctggagcagatcgcagagttggcgggtgtttcaaaaaccaatctgctgtattactttccg
tcaaaagaggcgctgtatattgccgtgctgcggcagattctcgatatctggctggcaccg
ttaaaagcgtttcgtgaagatttcgctccgctggcggcgataaaagagtacatccgtctg
aagctggaagtctcccgcgattatccgcaggcttcgcgcctgttctgtatggagatgctg
gcaggcgcgccgctgttaatggatgaactgacgggcgatttgaaggcattaattgatgag
aaatcggcgctgattgccggttgggtcaaaagcggcaaactcgcgccgattgatccgcag
catttgattttcatgatttgggcttccactcaacattacgccgatttcgcccctcaggtg
gaggcggtgacaggcgcgacgttgcgcgatgagatatttttcaatcaaacggttgaaaac
gtgcagcggattattattgaggggattcgaccacgttaa

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