Escherichia coli O103 H2 12009 (EHEC): ECO103_1059
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Entry
ECO103_1059 CDS
T01096
Symbol
ycdC
Name
(GenBank) predicted DNA-binding transcriptional regulator
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
eoh
Escherichia coli O103:H2 12009 (EHEC)
Brite
KEGG Orthology (KO) [BR:
eoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eoh03000
]
ECO103_1059 (ycdC)
Transcription factors [BR:
eoh03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
ECO103_1059 (ycdC)
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GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
Motif
Other DBs
NCBI-ProteinID:
BAI29904
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Position
1159344..1159982
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AA seq
212 aa
AA seq
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MTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFP
SKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEML
AGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQV
EAVTGATLRDEIFFNQTVENVQRIIIEGIRPR
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaggcgcagtgaaaacaacgggtaaacgttcgcgcgcagtaagcgcgaagaaa
aaagcgattcttagcgcagcactggacactttttcacaattcggttttcacggcacaagg
ctggagcagatcgcagagttggcgggtgtttcaaaaaccaatctgctgtattactttccg
tcaaaagaggcgctgtatattgccgtgctgcggcagattctcgatatctggctggcaccg
ttaaaagcgtttcgtgaagatttcgctccgctggcggcgataaaagagtacatccgtctg
aagctggaagtctcccgcgattatccgcaggcttcgcgcctgttctgtatggagatgctg
gcaggcgcgccgctgttaatggatgaactgacgggcgatttgaaggcattaattgatgag
aaatcggcgctgattgccggttgggtcaaaagcggcaaactcgcgccgattgatccgcag
catttgattttcatgatttgggcttccactcaacattacgccgatttcgcccctcaggtg
gaggcggtgacaggcgcgacgttgcgcgatgagatatttttcaatcaaacggttgaaaac
gtgcagcggattattattgaggggattcgaccacgttaa
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