Escherichia coli O103 H2 12009 (EHEC): ECO103_1581
Help
Entry
ECO103_1581 CDS
T01096
Symbol
yncC
Name
(GenBank) predicted DNA-binding transcriptional regulator
KO
K13654
GntR family transcriptional regulator, colanic acid and biofilm gene transcriptional regulator
Organism
eoh
Escherichia coli O103:H2 12009 (EHEC)
Brite
KEGG Orthology (KO) [BR:
eoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eoh03000
]
ECO103_1581 (yncC)
Transcription factors [BR:
eoh03000
]
Prokaryotic type
Helix-turn-helix
GntR family
ECO103_1581 (yncC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
DUF7744
HTH_24
RNA_pol_Rpb4
DUF6746
Motif
Other DBs
NCBI-ProteinID:
BAI30405
LinkDB
All DBs
Position
1664527..1665192
Genome browser
AA seq
221 aa
AA seq
DB search
MPGMGKMKHVSLTLQVENDLKHQLSIGALKPGARLITKNLAEQLGMSITPVREALLRLVS
VNALSVAPAQAFTVPEVRKRQLDEINRIRYELELMAVALAVENLTPQDLAELQELLEKLQ
QAQEKGDMEQIINVNRLFRLAIYHRSNMPILCEMIEQLWVRMGPGLHYLYEAINPAELRE
HIENYHLLLAALKAKDKEGCRHCLAEIMQQNIAILYQQYNR
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgcctggaatgggaaaaatgaaacatgtcagtttgactctgcaggttgagaacgacctg
aaacatcagcttagtattggcgcattaaaacctggcgcacgcctgattactaaaaatctg
gcggagcaattaggtatgagtattacacctgtgcgtgaagcattattacgtctggtttcg
gtgaatgcgctttctgtcgcacctgcacaagcatttacagttccggaagtgaggaaacgt
caattagacgaaatcaatcggatccgctacgaactggaattaatggcagttgctctggct
gttgaaaacctcaccccgcaagacctggcggaactccaggaattgctcgagaaattacag
caggcgcaagaaaagggcgacatggaacaaatcattaatgtaaacaggctatttcgctta
gcgatttatcatcgctcaaatatgcccatcctgtgtgagatgattgagcaactgtgggtc
aggatggggcctggtttacattatctctatgaagcgattaatccagcggaattacgggag
catatagaaaactatcatctgttactcgctgcgttaaaagcaaaagacaaagagggatgc
agacattgtcttgctgaaattatgcaacaaaatattgctattttataccagcaatacaat
cgttaa
DBGET
integrated database retrieval system
