Escherichia coli O103 H2 12009 (EHEC): ECO103_1942
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Entry
ECO103_1942 CDS
T01096
Symbol
xthA
Name
(GenBank) exonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
eoh
Escherichia coli O103:H2 12009 (EHEC)
Pathway
eoh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
eoh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ECO103_1942 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eoh03400
]
ECO103_1942 (xthA)
Enzymes [BR:
eoh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
ECO103_1942 (xthA)
DNA repair and recombination proteins [BR:
eoh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ECO103_1942 (xthA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Exo_endo_phos_3
Motif
Other DBs
NCBI-ProteinID:
BAI30743
LinkDB
All DBs
Position
2028657..2029463
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AA seq
268 aa
AA seq
DB search
MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK
GHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSLLGNVTVINGYFPQGESRDHPI
KFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL
PEEREWMDRLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC
CVETGIDYEIRSMEKPSDHAPVWATFRR
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtctcttttaatatcaacggcctgcgcgccagacctcaccagcttgaagcc
atcgtcgaaaagcaccaaccggatgtgattggcctgcaggagacaaaagttcatgacgat
atgtttccgctcgaagaggtggcgaagctcggctacaacgtgttttatcacgggcagaaa
ggccattatggcgtggcgctgctgaccaaagagacgccgattgccgtgcgtcgcggcttt
cccggtgacgacgaagaggcgcagcggcggattattatggcggaaatcccctcactgctg
ggtaatgtcaccgtgatcaacggttacttcccgcagggtgaaagccgcgaccatccgata
aaattcccggcaaaagcgcagttttatcagaatctgcaaaactacctggaaaccgaactc
aaacgtgataatccggtactgattatgggcgatatgaatatcagccctacagatctggat
atcggcattggcgaagaaaaccgtaagcgctggctgcgtaccggtaaatgctctttcctg
ccggaagagcgcgaatggatggacaggctgatgagctgggggttggtcgataccttccgc
catgctaatccgcaaacagcagatcgtttctcatggtttgattaccgctcaaaaggtttt
gacgataaccgtggtctgcgcatcgacctgctgctcgccagccaaccgctggcagaatgt
tgcgtagaaaccggcatcgactatgaaattcgcagcatggaaaaaccgtccgatcacgcc
cccgtctgggcgaccttccgccgctaa
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