Escherichia coli O103 H2 12009 (EHEC): ECO103_2564
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Entry
ECO103_2564 CDS
T01096
Symbol
gatR
Name
(GenBank) DNA-binding transcriptional repressor GatR of galactitol utilization
KO
K02436
DeoR family transcriptional regulator, galactitol utilization operon repressor
Organism
eoh
Escherichia coli O103:H2 12009 (EHEC)
Brite
KEGG Orthology (KO) [BR:
eoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eoh03000
]
ECO103_2564 (gatR)
Transcription factors [BR:
eoh03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
ECO103_2564 (gatR)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
GntR
HTH_11
CoA_trans
HTH_PafC
CggR_N
HTH_5
DUF977
FeoC
SelB_WH_2nd_bact
MarR
DsrD
Motif
Other DBs
NCBI-ProteinID:
BAI31340
LinkDB
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Position
complement(2580698..2581477)
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AA seq
259 aa
AA seq
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MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK
IMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMT
AKNITVITNSLPAAFALSENKDITLVVCGGTVRHKTRSMHGAIAERSLQDINADLMFVGA
DGIDAVNGITTFNEGYSISGAMVTAANKVIAVLDSSKFNRRGFNQVLPIEKIDIIITDDA
VSEVDKLALQKTRVKLITV
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgaattcattcgagcgaaggaataagatcatccaattagtgaatgaacaggga
accgtgcttgttcaggatctggcgggagtatttgctgcctcggaagcgacaatccgtgcc
gatttgcgctttctcgaacaaaaaggcgtggttacgcgctttcatggcggtgcggcgaaa
ataatgtccggtaatagtgaaaccgagacccaggaagtcgggtttaaagagcgatttcag
ctcgccagcgcgccgaaaaacagaatagcgcaggcggcagtcaaaatgatccatgaaggg
atgaccgttattctcgacagcggaagtaccacaatgcttatcgccgaaggattaatgacc
gccaaaaatatcacggtgattaccaacagtctcccggctgcgtttgccctttccgaaaat
aaagacattactctggtcgtctgcggtggcacggtccgccataaaacgcgatctatgcat
ggagctattgctgaacgttccctgcaggatattaatgccgatttaatgtttgtcggtgct
gatggtattgatgcggttaatggtattacgacctttaatgaaggttattcgattagcggt
gcgatggtcaccgccgctaataaagtgattgccgttctcgattcatcgaaatttaaccgt
cgcggttttaatcaggtactgccaatcgaaaaaattgacattattattaccgatgatgct
gtatcagaggtggataaactggcattgcagaagacacgggtaaaattaattacggtgtag
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