Escherichia coli O103 H2 12009 (EHEC): ECO103_3079
Help
Entry
ECO103_3079 CDS
T01096
Symbol
yfhD
Name
(GenBank) predicted transglycosylase
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
eoh
Escherichia coli O103:H2 12009 (EHEC)
Brite
KEGG Orthology (KO) [BR:
eoh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
eoh01011
]
ECO103_3079 (yfhD)
Enzymes [BR:
eoh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
ECO103_3079 (yfhD)
Peptidoglycan biosynthesis and degradation proteins [BR:
eoh01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
ECO103_3079 (yfhD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Lysozyme_like
Motif
Other DBs
NCBI-ProteinID:
BAI31832
LinkDB
All DBs
Position
3139978..3141396
Genome browser
AA seq
472 aa
AA seq
DB search
MSTIHTPLTYNEINGKPFGLDYELAKQFADYLGVKLKVTVRQNISQLFDDLDNGNADLLA
AGLVYNSERVKNYQPGPTYYSVSQQLVYKVGQYRPRTLGNLTAEQLTVAPGHVVVNDLQT
LKETKFPELSWKVDDKKGSAELMEDVIEGKLDYTIADSVAISLFQRVHPELAVALDITDE
QPVTWFSPLDGDNTLSAALLDFFNEMNEDGTLARIEEKYLGHGDDFDYVDTRTFLRAVDA
VLPQLKPLFEKYAEEIDWRLLAAIAYQESHWDAQATSPTGVRGMMMLTKNTAQSLGITDR
TDAEQSISGGVRYLQDMMSKVPESVPENERIWFALAAYNMGYAHMLDARALTAKTKGNPD
SWADVKQRLPLLSQKPYYSKLTYGYARGHEAYAYVENIRKYQISLVGYLQEKEKQATEAA
MQLAQDYPAVSPTELGKEKFPFLSFLSQSSSNYLTHSPSLLFSRKGSEEKQN
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccattcatactcccctgacttataacgaaatcaacgggaaaccttttggcctg
gattacgaactggcgaaacagtttgccgattacctcggcgtaaaactgaaagtgaccgtg
cggcagaatatcagccagctgtttgacgaccttgataatggtaacgccgacctgctggcg
gcaggactggtctataacagtgagcgggtaaaaaattatcagcctggccctacctattat
tccgtgtcacaacaactggtttataaagtgggtcagtatcgcccacgtacgctgggcaac
ctgacggcggagcaactcaccgttgcaccgggtcatgtggtggttaacgatctccagacc
ctgaaagaaacaaaattcccggaattaagctggaaggtagacgacaaaaaaggctctgcg
gaattaatggaagatgtcatcgaaggaaaactcgattacaccattgctgattctgtcgcc
atcagcctgtttcagcgcgttcacccggagctcgccgtagcgctcgatatcaccgatgaa
caaccggtgacttggtttagcccgttagatggcgataataccctttccgccgccctgctc
gacttcttcaacgaaatgaatgaagacggtacgctggcacgcattgaagagaaatacctg
gggcatggcgatgattttgattacgtcgatacgcgcacatttttacgcgccgtcgatgcg
gtactgccgcagttaaagcccctgtttgagaaatacgccgaagaaattgactggcgtttg
ctggccgctattgcttatcaggaatcgcactgggatgcacaggccacttcaccgacgggt
gtgcgcggcatgatgatgttaaccaaaaataccgcgcaaagcctcggcattacggatcgt
accgatgccgaacagagcatcagcggtggcgtgcgttatttgcaggatatgatgagtaaa
gtgccggaaagtgtgccggagaacgagcggatctggtttgccctcgctgcgtacaatatg
ggctatgcgcatatgctggatgcccgcgccctgacggcaaaaaccaaagggaatcctgac
agttgggctgacgtaaaacagcgtctgcctttacttagccagaaaccctattacagcaag
ctgacttacggctacgctcgtggacatgaagcctacgcttatgtcgaaaatattcgtaag
tatcagattagcctggtgggttatctgcaagagaaagagaagcaggctacagaagcggcg
atgcaactggcgcaggattatccggcggtatcgcctacggagttgggcaaagagaaattt
ccttttctctcgtttctttcccagtcgtcatcaaactatttgacccattctccctctctg
ctgttttccaggaaagggagtgaagagaaacaaaattaa
DBGET
integrated database retrieval system
