Escherichia coli O103 H2 12009 (EHEC): ECO103_3160
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Entry
ECO103_3160 CDS
T01096
Symbol
yfiF
Name
(GenBank) predicted methyltransferase
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
eoh
Escherichia coli O103:H2 12009 (EHEC)
Brite
KEGG Orthology (KO) [BR:
eoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eoh03009
]
ECO103_3160 (yfiF)
03016 Transfer RNA biogenesis [BR:
eoh03016
]
ECO103_3160 (yfiF)
Ribosome biogenesis [BR:
eoh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ECO103_3160 (yfiF)
Transfer RNA biogenesis [BR:
eoh03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
ECO103_3160 (yfiF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
BAI31911
LinkDB
All DBs
Position
complement(3205519..3206556)
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AA seq
345 aa
AA seq
DB search
MNDEMKGKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGRRPARDDKQSQPR
DRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALF
QSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKK
RNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAI
RTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEY
EGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNKA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatgaaatgaaaggtaaaagcggcaaggtcaaagtgatgtatgtccgcagtgat
gatgattctgataaacgtacccacaacccgcgtaccgggaaagggggcgggcgtccagga
aaatctcgtgctgacggtggccgtcgccccgcccgcgatgacaaacagagtcagccccgt
gaccgcaagtgggaagattcgccgtggcgcacggtttcccgcgcgccgggtgatgagacg
ccggaaaaggccgatcacggtggcatcagtggtaaaagttttattgatccggaagtgttg
cgtcgtcagcgtgcggaagaaacccgcgtctacggcgaaaatgcatgtcaggcacttttc
cagagccgtccggaagcgattgttcgcgcctggtttatccagagtgtaacgccgcgtttt
aaagaagccttgcgctggatggcagcaaaccgcaaagcgtaccatgtggtggatgaagcg
gaattgacaaaagcgtcaggcacggaacatcacggcggcgtttgcttcctgatcaaaaag
cgtaatggcacaaccgtgcagcagtgggtaagccaggcaggcgcgcaggattgtgtactg
gcgctggaaaacgaatctaacccgcataacctgggtggcatgatgcgcagctgcgcgcac
ttcggcgtgaaaggcgttgtggtgcaggatgcggcactgctggagtcgggggcggctatc
cgtaccgcagaaggcggcgcagagcacgttcagccgattactggcgacaacattgttaac
gtgttggatgatttccgtcaggcaggttacaccgtagtgaccacttccagcgagcagggg
aaaccgctgttcaaaaccagtctgccagcgaaaatggtactggtgctgggtcaggaatat
gaagggttaccggatgccgcacgcgatccgaacgatctgcgcgtgaagattgacggtacg
ggcaacgttgccgggctgaatatctctgttgcaaccggcgttttgcttggtgaatggtgg
cgtcagaataaagcctga
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