Escherichia coli O103 H2 12009 (EHEC): ECO103_3242
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Entry
ECO103_3242 CDS
T01096
Symbol
srlR
Name
(GenBank) DNA-binding transcriptional repressor SrlR
KO
K02468
DeoR family transcriptional regulator, glucitol operon repressor
Organism
eoh
Escherichia coli O103:H2 12009 (EHEC)
Brite
KEGG Orthology (KO) [BR:
eoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eoh03000
]
ECO103_3242 (srlR)
Transcription factors [BR:
eoh03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
ECO103_3242 (srlR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_PafC
HTH_5
HVO_A0114
HTH_20
Put_DNA-bind_N
FeoC
MarR_2
HTH_Mga
GntR
HTH_AsnC-type
FokI_D3
HTH_24
HTH_IclR
FaeA
Motif
Other DBs
NCBI-ProteinID:
BAI31993
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Position
3291853..3292626
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AA seq
257 aa
AA seq
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MKPRQRQAAILEYLQKQGKCSVEELAQYFDTTGTTIRKDLVILEHAGTVIRTYGGVVLNK
EESDPPIDHKTLINTHKKELIAEAAVSFIHDGDSIILDAGSTVLQMVPLLSRFNNITVMT
NSLHIVNALSELDNEQTILMPGGTFRKKSASFHGQLAENAFEHFTFDKLFMGTDGIDLNA
GVTTFNEVYTVSKAMCNAAREVILMADSSKFGRKSPNVVCSLESVDKLITDAGIDPAFRQ
ALEEKGIDVIITGESNE
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctcgtcagcgtcaggccgccattctggagtatctgcaaaagcagggtaaatgc
tcggttgaagaattggcgcaatactttgacaccacaggcacaaccattcgcaaagatctg
gtcattctggaacatgccggaaccgtcattcgtacttatggcggagtggtgttgaataaa
gaggaatccgatccgcctatcgatcataaaacgctcatcaacacccacaagaaagagctg
attgcagaagctgccgttagttttattcatgatggcgactcaataattcttgatgctggc
agtaccgttttgcagatggtccccctgctctcgcgctttaataacatcacggtgatgacc
aacagtctgcatatcgtcaatgcgctatctgaactggataacgaacaaaccatcctgatg
ccaggcggaacatttcgcaaaaaatcggcctcatttcacgggcaactggcagagaatgcc
ttcgagcatttcacctttgacaaattattcatgggtactgacggcatcgatctcaatgcg
ggcgtaaccaccttcaacgaggtctataccgtcagtaaggcaatgtgcaatgccgcgcgc
gaagtgattttaatggcggactcatcaaagtttggccgtaaaagccccaacgtagtttgc
agtcttgaaagcgtcgataagctgattaccgacgcaggtatcgatccggcgtttcgtcag
gcgctggaagagaaagggatcgatgtgatcataaccggagagagcaatgagtga
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