Escherichia coli O103 H2 12009 (EHEC): ECO103_4452
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Entry
ECO103_4452 CDS
T01096
Symbol
trmE
Name
(GenBank) GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
eoh
Escherichia coli O103:H2 12009 (EHEC)
Brite
KEGG Orthology (KO) [BR:
eoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eoh03016
]
ECO103_4452 (trmE)
Transfer RNA biogenesis [BR:
eoh03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
ECO103_4452 (trmE)
Prokaryotic type
Methyltransferases
ECO103_4452 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
Ras
AIG1
ABC_tran
Roc
Arf
AAA_28
SRPRB
Gtr1_RagA
AAA_18
Motif
Other DBs
NCBI-ProteinID:
BAI33153
LinkDB
All DBs
Position
complement(4575793..4577157)
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AA seq
454 aa
AA seq
DB search
MSDNDTIVAQATPPGRGGVGILRISGFKAREVAETVLGKLPKPRYADYLPFKDADGSVLD
QGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTIPGLRIARPGEFSERAFLNDK
LDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLVEALTHLRIYVEAAIDFPDEE
IDFLSDGKIEAQLNDVIAELDAVRAEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGRE
AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWQEIEQADRVL
FMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNKADITGETLGMSEVNGHALIRLSAR
TGEGVDVLRNHLKQSMGFDTNMEGGFLARRRHLQALEQAAEHLQQGKAQLLGAWAGELLA
EELRLAQQNLSEITGEFTSDDLLGRIFSSFCIGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataatgacactatcgtagcccaggccacgcctccgggacgtggcggcgttggc
atcctgcgcatctccggcttcaaagcccgtgaagttgccgaaaccgtgctgggtaaacta
cctaagccgcgctacgccgattatcttccgtttaaagacgccgacggcagcgtgctcgat
caggggattgcgctatggttccctggcccgaactcgttcaccggcgaagatgtgctggaa
ctgcaaggtcatggcggtccggtgatcctcgacctgctgttaaaacgcattctgaccatt
cccggcctgcggattgctcgccctggtgagttttccgaacgcgcgtttcttaacgataaa
ctcgacttagcccaggccgaggcgattgccgatcttatcgacgccagttcggaacaggcg
gcccgttcggcacttaactcgctgcaaggcgcattctccgcacgggtcaaccatctggtg
gaagccctcacccacttgcgcatttacgtcgaagcggcaattgatttccctgatgaagag
atcgatttcctctccgacggcaaaattgaagcccagcttaatgacgtgattgccgaactc
gatgcagtgcgtgctgaagcacgtcagggtagtttgttgcgcgaagggatgaaggtggtg
attgccggacgtcctaacgccggtaaatcgagcctgttaaacgcgctggcgggccgtgaa
gcagcaatcgtaactgatatcgccggaaccacacgtgacgtgctgcgtgagcatatccac
attgacggaatgccgctgcatatcatcgataccgctgggctacgtgaagccagtgacgaa
gtggaacgtattggtatcgagcgcgcgtggcaggaaattgaacaggccgaccgcgtgctg
tttatggtcgatggcaccacaacagacgccgtggatccggcagagatctggccggaattt
attgcccgtctgccagcgaaactgccgatcaccgtggtgcgcaataaagccgatatcacc
ggcgaaacgctgggaatgagtgaagtgaacggtcacgcgttaattcgtctctcggcaagg
actggtgaaggcgtggacgtgctgcgtaaccatctcaaacagagcatgggctttgacacc
aacatggaaggcggcttcctggcgcgtcgtcgccacctacaggcgctggaacaggcagcg
gaacatctacaacagggcaaagcgcaactgttgggagcctgggcaggtgaactgctggcg
gaagagttgcgtctggcacagcagaacttaagcgaaatcaccggggaatttacttcagac
gacctgctggggcggattttctccagcttctgtattggtaagtaa
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