Escherichia coli O103 H2 12009 (EHEC): ECO103_4622
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Entry
ECO103_4622 CDS
T01096
Symbol
rhaS
Name
(GenBank) DNA-binding transcriptional activator RhaS, L-rhamnose-binding
KO
K02855
AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
Organism
eoh
Escherichia coli O103:H2 12009 (EHEC)
Brite
KEGG Orthology (KO) [BR:
eoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eoh03000
]
ECO103_4622 (rhaS)
Transcription factors [BR:
eoh03000
]
Prokaryotic type
Helix-turn-helix
AraC family
ECO103_4622 (rhaS)
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
AraC_binding
HTH_AraC
Cupin_2
HTH_23
DUF4924
HemN_C
Motif
Other DBs
NCBI-ProteinID:
BAI33318
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Position
complement(4750840..4751676)
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AA seq
278 aa
AA seq
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MTVLHSVDFFPSGNASVAIEPRLPQADFPEHHHDFHEIVIVEHGTGIHVFNGQPYTITGG
TVCFVRDHDRHLYEHTDNLCLTNVLYRSPDRFQFLAGLNQLLPQELDGQYPSHWRVNHSV
LQQVRQLVAQMEQQEGENDLPSTASREILFMQLLLLLRKSSLQENLENSASRLNLLLAWL
EDHFADEVNWDAVAEQFSLSLRTLHRQLKQQTGLTPQRYLNRLRLMKARHLLRHSEASVT
DIAYRCGFSDSNHFSTLFRREFNWSPRDIRQGRDGFLQ
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtattacatagtgtggatttttttccgtctggtaacgcgtccgtggcgatagaa
ccccggctcccgcaggcggattttcctgaacatcatcatgattttcatgaaattgtgatt
gtcgaacatggcacgggtattcatgtgtttaatgggcagccctataccatcaccggtggc
acggtctgttttgtgcgcgaccatgatcggcatctgtatgaacataccgataatctgtgt
ctgactaatgtgctgtatcgctcgccggatcgatttcagtttctcgccgggctgaatcag
ttgctgccacaagagctggatgggcagtatccttcccactggcgcgttaaccacagcgta
ttgcagcaggtgcgacagctggttgcacagatggaacagcaggaaggggaaaatgattta
ccctcgaccgccagtcgcgagatcttgtttatgcaattactgctcttgctgcgtaaaagc
agtttgcaggagaacctggaaaacagcgcatcacgtctcaacttgcttctggcctggctg
gaggaccattttgccgatgaggtgaattgggatgccgtggcggagcaattttctctttcg
ctgcgtacgctacatcggcagcttaagcagcaaacgggactgacgcctcagcgttacctg
aaccgcctgcgactgatgaaagcccgacatctactacgccacagcgaggccagcgttact
gatatcgcctatcgctgtggattcagcgacagtaaccacttttcgacgctttttcgccga
gagtttaactggtcaccgcgtgatattcgtcagggacgggatggttttctgcaataa
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