Escherichia coli O103 H2 12009 (EHEC): ECO103_4660
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Entry
ECO103_4660 CDS
T01096
Symbol
yiaJ
Name
(GenBank) predicted DNA-binding transcriptional repressor
KO
K21602
IclR family transcriptional regulator, regulator of plant utilization
Organism
eoh
Escherichia coli O103:H2 12009 (EHEC)
Brite
KEGG Orthology (KO) [BR:
eoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eoh03000
]
ECO103_4660 (yiaJ)
Transcription factors [BR:
eoh03000
]
Prokaryotic type
Helix-turn-helix
IclR family
ECO103_4660 (yiaJ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HVO_A0261_N
TrmB
HTH_24
HTH_36
Rrf2
ApoA-II
DUF7406
Motif
Other DBs
NCBI-ProteinID:
BAI33355
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Position
4796176..4797024
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AA seq
282 aa
AA seq
DB search
MGKEVMGKKENEMAQEKERPAGSQSLFRGLMLIEILSNYPNGCPLAHLSELAGLNKSTVH
RLLQGLQSCGYVTTAPAAGSYRLTTKFIAVGQKALSSLNIIHIAAPHLEALNIATGETIN
FSSREDDHAILIYKLEPTTGMLRTRAYIGQHMPLYCSAMGKIYMAFGHPDYVKSYWENHQ
HEIQPLTRNTITELPAMFDELAHIRESGAAMDREENELGVSCIAVPVFNIHGRVPYAVSI
SLSTSRLKQVGEKNLLKPLRETAQAISNELGFTVRDDQGAIT
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagaagtgatgggaaaaaaagagaacgagatggcgcaggaaaaagagcgtcca
gccggaagccagagtctgtttcgcgggttgatgctgattgagattttgagcaactatcca
aacggttgtccgttggcgcatctttcggagctggctggtttaaataagagtaccgtccat
cgcttattgcagggattacagtcctgcggctatgtgaccaccgcgcccgccgcagggagt
taccgcctgactaccaaatttattgccgtcgggcagaaggcgctgtcttcgctgaatatc
attcatatcgccgctccgcatcttgaggcactgaacatcgccactggtgaaaccattaac
ttctccagccgcgaagacgatcacgctattttgatttataagctggaacccacaaccggg
atgctgcgaacccgtgcctatattggccagcatatgccgctctactgttccgcaatgggc
aagatctacatggcgtttggtcacccggactacgtgaagtcatactgggaaaaccatcag
catgagatccagccgttaacccgcaataccattaccgagctgcccgcgatgttcgacgaa
ctggcgcacattcgtgaaagcggagcggcgatggacagagaagaaaacgaactcggcgtc
tcctgtattgctgttccggtgtttaatattcatgggcgggtgccgtacgccgtgtcgatt
tcgctttcgacatcacgtctgaaacaggtgggggagaaaaatctcctgaaaccactgcgt
gaaaccgcgcaggctatttctaatgaactgggatttactgtcagggacgaccagggcgcg
atcacataa
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