Escherichia coli O103 H2 12009 (EHEC): ECO103_4812
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Entry
ECO103_4812 CDS
T01096
Symbol
soxS
Name
(GenBank) DNA-binding transcriptional dual regulator SoxS
KO
K13631
AraC family transcriptional regulator, mar-sox-rob regulon activator
Organism
eoh
Escherichia coli O103:H2 12009 (EHEC)
Brite
KEGG Orthology (KO) [BR:
eoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eoh03000
]
ECO103_4812 (soxS)
Transcription factors [BR:
eoh03000
]
Prokaryotic type
Helix-turn-helix
AraC family
ECO103_4812 (soxS)
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
BAI33501
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Position
complement(4988718..4989041)
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AA seq
107 aa
AA seq
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MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL
LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatcagaaaattattcaggatcttatcgcatggattgacgagcatattgaccag
ccgcttaacattgatgtagtcgcaaaaaaatcaggctattcaaagtggtacttgcaacga
atgttccgcacggtgacgcatcagacgcttggcgattacattcgccaacgtcgcctgtta
ctggccgccgttgagttgcgcaccaccgagcgtccgatttttgatatcgcaatggacctg
ggttatgtctcgcagcagaccttctcccgcgttttccgtcggcagtttgatcgcactccc
agcgattatcgccaccgcctgtag
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