Escherichia coli O103 H2 12009 (EHEC): ECO103_ncRNA46
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Entry
ECO103_ncRNA46 ncRNA
T01096
Symbol
csrB
Name
(GenBank) CsrA-binding sRNA, antagonizing CsrA regulation; blocks the CsrA binding of glgC mRNA
KO
K18515
small regulatory RNA CsrB
Organism
eoh
Escherichia coli O103:H2 12009 (EHEC)
Pathway
eoh02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
eoh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
ECO103_ncRNA46 (csrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eoh03019
]
ECO103_ncRNA46 (csrB)
09184 RNA family
03100 Non-coding RNAs [BR:
eoh03100
]
ECO103_ncRNA46 (csrB)
Messenger RNA biogenesis [BR:
eoh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Bacterial Small RNA Regulators
ECO103_ncRNA46 (csrB)
Non-coding RNAs [BR:
eoh03100
]
Other RNA
Unclassified
ECO103_ncRNA46 (csrB)
BRITE hierarchy
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All DBs
Position
complement(3391189..3391548)
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NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
gagtcagacaacgaagtgaacatcaggatgatgacacttctgcaggacacaccaggatgg
tgtttcagggaaaggcttctggatgaagcgaagaggatgacgcaggacgcgttaaaggac
acctccaggatggagaatgagaaccggtcaggatgattcggtgggtcaggaaggccaggg
acacttcaggatgaagtatcacatcggggtggtgtgagcaggaagcaatagttcaggatg
aacgattggccgcaaggccagaggaaaagttgtcaaggatgagcagggagcaacaaaagt
agctggaatgctgcgaaacgaaccgggagcgctgtgaatacagtgctccctttttttatt
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