Escherichia coli O111 H- 11128 (EHEC): ECO111_0973
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Entry
ECO111_0973 CDS
T01097
Symbol
ycaO
Name
(GenBank) conserved predicted protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
eoi
Escherichia coli O111:H- 11128 (EHEC)
Brite
KEGG Orthology (KO) [BR:
eoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eoi03009
]
ECO111_0973 (ycaO)
Ribosome biogenesis [BR:
eoi03009
]
Prokaryotic type
ribosomal protein modification factors
ECO111_0973 (ycaO)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
BAI34928
LinkDB
All DBs
Position
complement(1043864..1045624)
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AA seq
586 aa
AA seq
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MTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNG
KGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEG
LLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTVYIPMNIIGNLYVS
NGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAE
GFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
DVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLM
AIFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSHLRETILSLPGS
EWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGDLEQ
ALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAVEAA
SAAMSGEAAFYGLQPVDSDLHAFAAHQSLLKAYEKLQRAKAAFWAK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaacatttatccccggcaaagatgccgctctggaagattccatcgctcgcttc
cagcaaaaactttcagacctcggctttcagattgaagaggcctcctggctgaatcctgtg
cctaacgtctggtctgtacatattcgcgacaaagagtgcgcactgtgttttaccaacgga
aaaggcgcaaccaaaaaagcggcgctggcttctgcacttggtgaatatttcgagcgtctc
tcaaccaactacttttttgctgatttctggctgggcgaaaccatcgccaacggtccgttc
gtgcattatcccaacgaaaaatggttcccactgaccgaaaatgacgatgtgccagaagga
ctactcgatgaccgtctgcgcgcgttttatgatccggagaatgaactgaccggcagcatg
ctgattgacctacaatccggtaacgaagatcgtggtatttgcggcctgccgtttacgcgt
cagtccgacaatcagaccgtttatattccgatgaatatcattggtaacctgtacgtctcc
aacggtatgtccgcaggtaatacccgcaacgaagcacgcgttcagggattgtctgaagtt
ttcgaacgctacgtgaaaaaccgcattattgctgaaagcatcagcctgccagagatcccg
gcagacgtgctggcgcgttacccagcagtagttgaagccatcgaaacgctggaagcggag
ggtttcccaatcttcgcttatgacggttcgcttggcggccagtatccggtgatttgcgtg
gtactgttcaatcctgctaacggtacctgctttgcctctttcggtgcgcatcctgatttt
ggcgtagcactggaacgtaccgtgaccgagctgctgcaaggtcgtggcctgaaagatttg
gatgtgtttactccgccaaccttcgatgatgaagaagtcgctgaacataccaacctcgaa
acgcactttatcgattccagcggtttaatctcctgggacctgttcaagcaggatgccgat
tatccgtttgtggactggaatttctccggcaccacggaagaagagtttgctacgctgatg
gctatcttcaacaaagaagataaagaagtttatattgccgattacgagcatctgggcgtt
tatgcttgccgtattatcgtgcctggcatgtccgatatttatccggctgaagatctgtgg
ctcgcgaataacagtatgggcagccatttacgtgaaacgattctttcgctaccaggcagc
gagtgggaaaaagaagattacctgaacctcatcgagcaactggatgaagaaggttttgat
gactttacccgcgtgcgtgagctgttgggtctggcgaccgggtcggataacggttggtac
accctgcgtatcggtgaattaaaagccatgctggcgctggctggtggcgatctggaacag
gctctggtctggaccgaatggacgatggagtttaactcatcagtatttagtccggaacgc
gccaactattatcgctgcctgcaaacgttgttattactggcacaggaagaagatcgccag
cctctgcaatatctgaatgcgtttgttcgcatgtacggcgcagatgccgtagaagccgcc
agtgcggcaatgagcggcgaagcggcgttttacggcctgcaaccggtagatagcgatctg
cacgcgtttgctgcacatcagtcgttgttgaaggcctacgaaaagctgcagcgcgccaaa
gcagcattctgggcaaaataa
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