Escherichia coli O111 H- 11128 (EHEC): ECO111_1830
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Entry
ECO111_1830 CDS
T01097
Symbol
ydcT
Name
(GenBank) predicted spermidine/putrescine transporter subunit
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
eoi
Escherichia coli O111:H- 11128 (EHEC)
Pathway
eoi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
eoi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ECO111_1830 (ydcT)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eoi02000
]
ECO111_1830 (ydcT)
Transporters [BR:
eoi02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
ECO111_1830 (ydcT)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA_22
ABC_ATPase
AAA_16
AAA_29
Motif
Other DBs
NCBI-ProteinID:
BAI35735
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Position
1842187..1843200
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AA seq
337 aa
AA seq
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MTYAVEFDNVSRLYGDVRAVDGVSIAIKDGEFFSMLGPSGSGKTTCLRLIAGFEQLSGGA
ISIFGKPASNLPPWERDVNTVFQDYALFPHMSILDNVAYGLMVKGVNKKQRHAMAQEALE
KVALGFVHQRKPSQLSGGQRQRVAIARALVNEPRVLLLDEPLGALDLKLREQMQLELKKL
QQSLGITFIFVTHDQGEALSMSDRVAVFNNGRIEQVDSPRDLYMRPRTPFVAGFVGTSNV
FDGLMAEKLCGMTGSFALRPEHIRLNPPGELQANGTIQAVQYQGAATRFELKLNGGEKLL
VSQANMTGEELPATLTPGQQVMVSWSRDVMVPLVEER
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgacgtacgcagtggagtttgacaacgtctcgcggttgtacggtgacgtgcgcgcagta
gatggcgtcagtattgcgataaaagatggtgagttcttctctatgctggggccgtccggc
tccggcaaaaccacctgcctgcgcctgattgctggcttcgaacagctttccggcggggct
atctctatctttggtaaacccgccagcaatctgccaccgtgggagcgggacgtgaatact
gtctttcaggactacgcgctatttccgcatatgtcgattcttgacaatgtcgcctatggg
ctgatggtcaaaggcgtgaataaaaagcagcggcacgcaatggcgcaagaggcgctggag
aaagtggcgttggggtttgtacatcaacgtaaaccgtcacaactttctggtggtcagcgc
cagcgggttgctatcgccagagcattggtgaatgaaccgcgcgtattgctgttggatgaa
ccgctcggcgcactggatctcaaattgcgtgagcagatgcagctggaactgaaaaaactg
caacagtctctcggtatcacttttatcttcgttacccacgatcagggcgaagcgttatcg
atgtccgatcgtgtggcggttttcaataatggacgcattgagcaggtcgattccccgcgc
gatctctatatgcgcccgcgcacgccgtttgttgccggattcgtcgggacatccaacgtt
tttgatggactgatggcagagaaactttgtggcatgacgggaagcttcgccctgcgaccg
gaacatatccgcctcaacccccctggtgaactgcaggccaatggcacgatccaggcggtg
caatatcagggcgcggcaactcgttttgaactgaaattgaacggcggtgaaaaactgctt
gtgagtcaggccaatatgacaggcgaagaactgcctgccacgctcacgcccggacaacag
gtgatggtttcctggtcgcgtgatgtgatggtgccgctggttgaggagaggtga
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