Escherichia coli O111 H- 11128 (EHEC): ECO111_1841
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Entry
ECO111_1841 CDS
T01097
Symbol
yncC
Name
(GenBank) predicted DNA-binding transcriptional regulator
KO
K13654
GntR family transcriptional regulator, colanic acid and biofilm gene transcriptional regulator
Organism
eoi
Escherichia coli O111:H- 11128 (EHEC)
Brite
KEGG Orthology (KO) [BR:
eoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eoi03000
]
ECO111_1841 (yncC)
Transcription factors [BR:
eoi03000
]
Prokaryotic type
Helix-turn-helix
GntR family
ECO111_1841 (yncC)
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Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
DUF7744
HTH_24
RNA_pol_Rpb4
DUF6746
Motif
Other DBs
NCBI-ProteinID:
BAI35746
LinkDB
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Position
1850956..1851621
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AA seq
221 aa
AA seq
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MPGMGKMKHVSLTLQVENDLKHQLSIGALKPGARLITKNLAEQLGMSITPVREALLRLVS
VNALSVAPAQAFTVPEVRKRQLDEINRIRYELELMAVALAVENLTPQDLAELQELLEKLQ
QAQEKGDMEQIINVNRLFRLAIYHRSNMPILCEMIEQLWVRMGPGLHYLYEAINPAELRE
HIENYHLLLAALKAKDKEGCRHCLAEIMQQNIAILYQQYNR
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgcctggaatgggaaaaatgaaacatgtcagtttgactctgcaggttgagaacgacctg
aaacatcagcttagtattggcgcattaaaacctggcgcacgcctgattactaaaaatctg
gcggagcaattaggtatgagtattacacctgtgcgtgaagcattattacgtctggtttcg
gtgaatgcgctttctgtcgcacctgcacaagcatttacagttccggaagtgaggaaacgt
caattagacgaaatcaatcggatccgctacgaactggaattaatggcagttgctctggct
gttgaaaacctcaccccgcaagacctggcggaactccaggaattgctcgagaaattacag
caggcgcaagaaaagggcgacatggaacaaatcattaatgtaaacaggctatttcgctta
gcgatttatcatcgctcaaatatgcccatcctgtgtgagatgattgagcaactgtgggtc
aggatggggcctggtttacattatctctatgaagcgattaatccagcggaattacgggag
catatagaaaactatcatctgttactcgctgcgttaaaagcaaaagacaaagagggatgc
agacattgtcttgctgaaattatgcaacaaaatattgctattttataccagcaatacaat
cgttaa
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