Escherichia coli O111 H- 11128 (EHEC): ECO111_3385
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Entry
ECO111_3385 CDS
T01097
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase I, NADP-dependent
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
eoi
Escherichia coli O111:H- 11128 (EHEC)
Pathway
eoi00250
Alanine, aspartate and glutamate metabolism
eoi00310
Lysine degradation
eoi00350
Tyrosine metabolism
eoi00650
Butanoate metabolism
eoi00760
Nicotinate and nicotinamide metabolism
eoi01100
Metabolic pathways
eoi01120
Microbial metabolism in diverse environments
Module
eoi_M00027
GABA (gamma-Aminobutyrate) shunt
eoi_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
eoi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
ECO111_3385 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
ECO111_3385 (gabD)
00310 Lysine degradation
ECO111_3385 (gabD)
00350 Tyrosine metabolism
ECO111_3385 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
ECO111_3385 (gabD)
Enzymes [BR:
eoi01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
ECO111_3385 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
ECO111_3385 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
ECO111_3385 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
BAI37191
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Position
3354814..3356262
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AA seq
482 aa
AA seq
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MKLNDSNLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRA
LPAWRALTAKERANILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFA
EEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGNELTSNPMVRKLSFTGSTEIGRQ
LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDG
VYDRFAEKLQQAVSKLHIGDGLDKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKA
DERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYA
RDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI
GL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttaacgacagtaacttattccgccagcaggcgttgattaacggggaatggctg
gacgccaacaatggtgaagtcatcgacgtcaccaatccggcgaacggcgacaagctgggt
agcgtgccgaaaatgggcgctgatgaaacccgcgccgctatcgacgccgccaaccgcgcc
ctgcccgcctggcgtgcgctcaccgccaaagaacgcgccaacattctgcgcaactggttc
aatttgatgatggagcatcaggacgatttagcgcgcctgatgaccctcgaacagggcaaa
ccactggccgaagcgaaaggtgaaatcagctacgccgcctcttttattgagtggtttgcc
gaagaaggcaaacgcatttatggcgacaccattcccggtcatcaggccgataaacgcctg
attgttatcaagcagccgattggcgttaccgcagctatcacgccgtggaacttcccggcg
gcgatgattacccgtaaagccggtccggcgctggcggcaggctgcaccatggtgctgaag
cccgccagtcagacaccgttctctgcgctggcgctggcggagctggcgattcgcgcgggc
attccggctggcgtgtttaacgtggtcaccggttcggcaggcgcggtcggtaatgaactg
accagcaacccgatggtacgcaaactgtcgtttaccggttcgaccgaaattggccgccag
ttaatggaacagtgcgcgaaagacatcaaaaaagtgtcgctggagctgggcggcaacgcg
ccgtttatcgtctttgacgatgccgatctcgataaagccgtggaaggcgcgctggcctcg
aaattccgcaacgccgggcaaacctgcgtctgcgccaaccgtttatacgtgcaggacggc
gtgtatgaccgctttgccgaaaaattgcagcaggcggtgagcaaactgcacatcggcgac
gggctggataaaggcgtcaccatcgggccgctgatcgatgaaaaagcggtagcaaaagtg
gaagagcatattgccgatgcgctggagaaaggtgcgcgtgtggtttgcggcggtaaagcg
gatgaacgcggcggcaacttcttccagccgaccattctggtggacgtgccggccaacgcc
aaagtgtcgaaagaagagacgttcggccccctcgccccgctgttccgctttaaagatgaa
gccgatgtgattgcgcaagccaatgacaccgagtttggccttgccgcctatttctacgcc
cgtgatttaagccgcgtcttccgcgtgggcgaagcgctggagtacggcatcgtcggcatc
aataccggcattatttccaatgaagtggccccgttcggcggcatcaaagcctcgggtctg
ggtcgtgaaggttcgaagtatggcatcgaagattacttagaaatcaaatatatgtgcatc
ggtctttaa
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