Escherichia coli O111 H- 11128 (EHEC): ECO111_3683
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Entry
ECO111_3683 CDS
T01097
Name
(GenBank) putative transcriptional regulator, NtrC family
KO
K17473
sigma-54 dependent transcriptional regulator, dga operon transcriptional activator
Organism
eoi
Escherichia coli O111:H- 11128 (EHEC)
Brite
KEGG Orthology (KO) [BR:
eoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eoi03000
]
ECO111_3683
Transcription factors [BR:
eoi03000
]
Prokaryotic type
Helix-turn-helix
Other families
ECO111_3683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PRD
Sigma54_activ_2
AAA_5
AAA_22
NACHT
AAA
TrmB
HTH_Crp_2
AAA_14
Mg_chelatase
AAA_2
AAA_16
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BAI37473
LinkDB
All DBs
Position
complement(3670766..3673564)
Genome browser
AA seq
932 aa
AA seq
DB search
MRRIDVIHKELERLTYGLELSDLAKEKAFTAEAIGFNLGLARNSVSKDLNQLWNEGLVVK
SQGRPVFFLHRHALELLINRKLDDCECIVHSVASLLPKKEKYTDDDPFSGLIGYDRSLRD
AVEKGRAAVLYPHGLHVLLTGASGVGKTFFAELMHCFACKHTIGSPPPLVYFNCAEYAHN
PELLSSHLFGHHKGAFTGASENKTGLVEQADGGYLLLDEVHRLPYEGQEKLFSILDKGEY
RPLGSSGPTYSISVRLICATTESVNSALLRTFQRRIQVCIDLPGIRQRSVEEQLELIVSF
FQRESRKIERTISLDKTLLHWLLSKPLEGNIGQLKSDIQFLCAQAWASGMTERNDTLELD
KRLAEMSFNTTPEQRLLVDALFGGKDRLNVDARTLPALKNSLATSAEIEESDLFYSFLTR
EYVNLRNSNVPPAETLAILKNKLSSIFEYGLYSRHSAAHPPRYGDQIEERVTLLIGYVEQ
VLGFTLPENLANPLRKHFLALIGYVRRGLIPQLYSSSLILDRCKDEYDNATLLCRKINEL
LHIQCPATEVVWLCLFLKECRHYRQRIDTSPDCGVILIAHGATTATSQAQYVNRVLERDL
FYAIDMPFEQSVHDTLETLTRMIQDRCWQRLILMVDIGSLVHFGSTISKLFQIDVLLLPN
ITLTSLLEVGLDLSYETGDLSQLAVLMQSKNIPCRLCTPQQESGGKVLVISCITGMGTAE
KIKKVLEESFGELMSQDTRMVILDYNEVRSLERIQQALNASERLAGIVGTFQPGLPDIPF
ISLEELFSEQGPELVLSLLTPDLSSSERRLEMERSAMRFISALTMESIINHISVLNPQRI
LKEIEDVLNYLTNTLSLKPSRQVTLRFLIHCCCMVERIVINRKPLQMALENRLDLDARAF
SVIKSSFLPIEEAYAIRLSDAEYFYIYELLYS
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgagacggattgatgttattcacaaggagctggagcggctgacgtatgggctggaactg
tctgatttagcgaaggagaaagcatttactgctgaggcgattggttttaatcttgggctg
gcacgcaactcggttagtaaagatcttaatcaattatggaatgaaggcctggtggtaaaa
agtcagggacgtcctgttttttttctacatcgtcacgcactagaattgctcattaatcga
aaactggatgattgcgaatgcatagttcattcagtggctagtttattgccaaagaaagaa
aaatatacagatgatgatccgttttccggacttatcggatacgaccgtagtctccgtgat
gcggtagaaaaaggccgcgcagcggtgctttatccccacggactacatgtgctgttaacc
ggtgcatctggtgttggcaaaacattctttgctgagttaatgcattgcttcgcttgcaag
cacaccataggttcgccacctccgttggtttactttaactgtgccgaatatgctcataat
ccggagttgctttcctcacatctgtttggtcaccataagggggcatttaccggggcaagt
gagaataaaacgggattggtggagcaagctgacggaggttatttacttctggatgaagtg
catcgcctcccgtacgaaggacaagagaagctcttttctattctcgataaaggtgaatac
cgcccacttggttcaagtgggccaacatattcaatttcggtgcgccttatttgcgccact
acagagtcggtcaactcggcactattgcgtaccttccagcggcgtatccaggtatgtatt
gacttaccgggtattcgccagcgttcggtcgaggagcagctcgaattgattgtaagcttc
tttcagcgtgaaagtcgtaaaattgaacgtaccataagccttgataaaacgctcttgcat
tggttgttaagtaaacccctggaaggcaatatcggccagcttaaaagtgatattcagttc
ttgtgcgcgcaggcgtgggcgtcgggaatgaccgagcgtaatgatacgctagagttagat
aaacgactggcggagatgtcgtttaataccacgccagagcagcgtctgctggtcgatgcg
ttgtttggcggtaaagatcgtctgaacgtggatgcgcgtacgttgcccgcgttaaaaaat
tcgttggcgaccagcgcggaaatagaagagagcgacctgttttacagtttcctgactcgt
gaatatgtcaatctgcgcaacagtaacgtgccgcccgcagaaacgctggctatcctgaaa
aacaaactcagttcgatttttgaatatggtctttatagccgccatagtgcggcgcatcca
ccgcgctatggcgatcaaattgaggagcgtgtgacgctgctgatcggttacgtggagcag
gtattaggatttacattgccagaaaacctggcgaacccgttacgtaaacactttcttgcg
ctgattggctatgtgcggcgagggcttatacctcaactctattcatccagcctgattctg
gatcgctgtaaagatgagtatgacaatgccacgcttctgtgccgcaaaatcaatgagttg
ttgcatattcagtgcccggcgacggaggtggtctggctgtgcctgttcctgaaagagtgt
cgccactaccgccagcgcatcgacaccagcccggattgcggcgtgattctaatcgctcac
ggtgcgaccaccgcaacgagccaggcgcaatatgtgaaccgggtgctggagcgcgatctg
ttctacgcaattgatatgccatttgagcagtcggtgcatgacaccctggaaaccctgacc
cggatgattcaggaccggtgctggcagcggctgatactgatggtggatatcggatcgctg
gtccattttggcagcaccatcagcaagctgttccagattgacgttctgttgttgccaaat
atcactctgaccagcctgctggaggttgggctggatttaagctacgaaactggcgatcta
tcgcaattggctgtgcttatgcagagtaaaaatatcccttgtcggctctgcacgccgcag
caagagagcggtggcaaagtgctggttatctcatgtataaccggaatggggacggcggaa
aagatcaaaaaggtgctggaggagagctttggcgagctgatgtcgcaggacacgcgtatg
gtgattctcgactataacgaggtgcgcagcctggagcgtattcagcaggcgcttaatgcc
agtgaacggctggcagggatcgtcggcaccttccagccgggactgccggatataccgttt
atctcgctggaggaactgttttccgagcaagggccggagctggtgctcagcctgctgacg
ccggatctctcaagcagcgagcgccgactggagatggagcgcagcgccatgcgctttatc
agcgcgctgaccatggagagcatcatcaaccatatttcggtgctcaacccgcagcgaatt
ctgaaagagatcgaggatgttctgaactacttaaccaacacgctctccctgaaaccgagc
cgccaggtgacactacgttttctgatccactgctgctgcatggtcgagcgtatcgtgatt
aaccgcaaaccgttacagatggcgctagaaaaccggcttgatctggacgctcgtgccttt
agcgtcatcaaatcctcctttttgccgattgaagaggcttacgctatccgtttatcggac
gcagaatatttttatatctacgaactgctctacagctga
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