Escherichia coli O111 H- 11128 (EHEC): ECO111_5250
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Entry
ECO111_5250 CDS
T01097
Symbol
radA
Name
(GenBank) predicted repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
eoi
Escherichia coli O111:H- 11128 (EHEC)
Brite
KEGG Orthology (KO) [BR:
eoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eoi03400
]
ECO111_5250 (radA)
DNA repair and recombination proteins [BR:
eoi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ECO111_5250 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
RecA
Rad51
GvpD_P-loop
AAA_22
SLFN-g3_helicase
AAA_14
ABC_tran
AAA_16
nSTAND3
AAA_24
AAA
DUF7125
NTPase_1
cobW
Zeta_toxin
Zn_ribbon_Thio2
AAA_29
DZR
Viral_helicase1
AAA_5
AAA_30
Herpes_Helicase
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
BAI38962
LinkDB
All DBs
Position
5355391..5356773
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AA seq
460 aa
AA seq
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MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPTVARNERLSGYAGSAGV
AKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLA
QQMKTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIEQICLIAEEEQPKLMVIDSIQ
VMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS
VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSV
MVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV
NVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAA
KHGFRRAIVPAANVPKKAPEGMQIFGVKKLSDALSVFDDL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaagctccaaaacgcgcctttgtttgtaatgaatgcggggccgattatccgcgc
tggcaggggcagtgcagtgcctgtcatgcctggaacaccatcaccgaggtgcgtcttgct
gcgtcgccaacggtggcgcgtaacgagcgtctcagcggctatgccggtagcgccggggtg
gcaaaagtccagaaactctccgatatcagccttgaagagctgccgcgtttttccaccgga
tttaaagagttcgaccgcgtactaggcggcggcgtggtgccaggaagcgccattctgatt
ggcggtaacccaggtgcggggaaatccacgctgctactgcaaacgctgtgcaaactggcc
cagcagatgaaaacgctgtatgtcactggcgaagagtcgctgcaacaggtggcaatgcgc
gctcatcgccttggcctgccgactgacaatctcaatatgttgtcggaaaccagcatcgaa
cagatctgcctgattgccgaagaagagcaaccgaaactgatggtaattgactcgatccag
gtgatgcatatggcggatgtacaatcatcgcctggtagcgtggcgcaggtgcgtgaaacg
gcggcttatctgacgcgcttcgccaaaacgcgcggtgtggcgattgtcatggttgggcac
gtaaccaaagatggctcgctggctggccctaaagtgctggaacactgtatcgactgttcg
gtgcttctggatggtgatgccgactcccgttttcgcaccttgcgcagccataaaaaccgc
ttcggcgcggtgaatgagctgggcgtcttcgcgatgaccgaacaggggctgcgtgaagtc
agcaacccttcggcaattttcttaagtcgcggagatgaagtgacctccggcagctccgtg
atggtggtgtgggaaggaacgcgtccgttgctggtggagattcaggcgctggtcgatcac
tcgatgatggcgaatccgcgccgcgtggcagtggggctggaacaaaaccgtctggcaatc
ctgctggctgtcttgcaccgtcacggtggtctgcaaatggccgatcaggatgtatttgtg
aacgtggtcggcggcgtgaaggtaaccgaaaccagtgccgatttagcgttactgctggcg
atggtttccagcctgcgtgacagaccgctgccacaggatctggtggtgtttggtgaagtc
gggctggcaggggagatccgcccggtgcccagcggtcaggaacgaatttcagaagcggcg
aaacacggttttcgccgggcgattgttccggcggctaacgtaccgaaaaaagcgccggaa
gggatgcagatttttggcgttaaaaaactctccgacgcgcttagcgtgttcgacgactta
taa
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