Escherichia coli O111 H- 11128 (EHEC): ECO111_ncRNA66
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Entry
ECO111_ncRNA66 ncRNA
T01097
Symbol
csrC
Name
(GenBank) CsrC sRNA sequesters CsrA, a carbon flux regulator; also affects biofilms and motility
KO
K18516
small regulatory RNA CsrC
Organism
eoi
Escherichia coli O111:H- 11128 (EHEC)
Pathway
eoi02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
eoi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
ECO111_ncRNA66 (csrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eoi03019
]
ECO111_ncRNA66 (csrC)
09184 RNA family
03100 Non-coding RNAs [BR:
eoi03100
]
ECO111_ncRNA66 (csrC)
Messenger RNA biogenesis [BR:
eoi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Bacterial Small RNA Regulators
ECO111_ncRNA66 (csrC)
Non-coding RNAs [BR:
eoi03100
]
Other prokaryotic RNA
Small regulatory RNA
ECO111_ncRNA66 (csrC)
BRITE hierarchy
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Gene cluster
GFIT
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Position
4730745..4730989
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NT seq
245 nt
NT seq
+upstream
nt +downstream
nt
atagagcgaggacgctaacaggaacaatgactcaggatgagggtcaggagcgccaggagg
cgaagacagaggattgtcaggaagacaaacgtccggagacgtaattaaacggaaatggaa
tcaacacggattgttccggctaaaggaaaaacagggtgtgttggcggcctgcaaggattg
taagacccgttaagggttatgagtcaggaaaaaaggcgacagagtaatctgtcgcctttt
ttctt
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