Escherichia coli O111 H- 11128 (EHEC): ECO111_p1-036
Help
Entry
ECO111_p1-036 CDS
T01097
Name
(GenBank) putative DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
eoi
Escherichia coli O111:H- 11128 (EHEC)
Pathway
eoi03420
Nucleotide excision repair
eoi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ECO111_p1-036
03430 Mismatch repair
ECO111_p1-036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eoi03400
]
ECO111_p1-036
Enzymes [BR:
eoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ECO111_p1-036
DNA repair and recombination proteins [BR:
eoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ECO111_p1-036
MMR (mismatch excision repair)
Other MMR factors
ECO111_p1-036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_22
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
BAI39008
LinkDB
All DBs
Position
pO111_1:38118..40157
Genome browser
AA seq
679 aa
AA seq
DB search
MTKRLTWEQKSIVNHDTGHALVKAVPGSGKTTTLVKRVERLVKTGTDPRSILILMYNKSA
QVSFTEKLKTALMSSVIPEIRTFHSLALKIVGYGERQQIIKKKDLITPSDYRYEQLVKQA
YRYGFDHEANYIDPNEIENFELFIARCRAAAVTPVDAANDPTFSNIKRGFIHAYGRYCEL
LEENSLRTFDDCLIEAVALLRNDSSLGAHFKHIIVDEYQDVNLIQHDMTRLLSKSDTSVM
AVGDVNQCIYEWRGARPDFIGGLFERHYPNTKVFQLSCTFRFGHELSLMANSVIRRNSTK
LTKLCVSHPSTPKTEVRLHFDNCLSKVLSNLSVSSGTQAILSRTKANLAEAEIVLRLCGL
PYRYLNGSSALHTRTEIGILVVGVLLSVYGDLRLLENHPNKQAIVYGFLKEAGFSWQKGQ
FKAALSGLMAPHADLWSALGQLFEGAQYQKDRLGRLATICQKDGEETPAIDVLRRLSMEG
FIDSVGSEGVTRTGSNDQQRGVVRIGELLDSSKIDSRTFLNLILNPGEAATDCDPFILST
LHGSKGLEWDNVILIGLNEQEFPGGKPDDVYSVRTSMNTPPAEEEIEEERRLFYVGITRT
KQQLNLVVPLDEGLARWLKNRWDSTPKKSPIATRFVYEAGWTACAVTSDAIYNSTVEKQK
ADFSKFHQWYLRDLQRLKV
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaagactgacttgggagcagaaaagtattgtcaaccatgacaccggacatgcg
ttggtaaaagccgtacctggtagcgggaaaacaaccacacttgtaaagcgcgttgagcgg
ctggtcaagacgggaactgatcctcgctccattctgatcctgatgtacaacaagtcggcg
caggtgagcttcacggagaagttgaagacggcactgatgtcgagcgtgattccagaaatc
cgcacgttccacagcttggccttaaagattgttggttacggagaacgccaacagataatc
aagaagaaagacctcattactccaagcgactaccgctatgagcaactggtaaagcaagcc
taccgctatggctttgaccatgaggcgaattatattgaccccaatgaaattgaaaacttc
gagctgtttattgctcgctgccgggcggcggccgtaactcctgttgatgctgccaatgat
ccaacgttcagcaacatcaaacgggggtttattcacgcctatggccgctattgtgagctg
ctggaggaaaacagtctgcgaacctttgatgactgtttgattgaggctgtcgcactgttg
cgtaatgacagcagccttggtgcccacttcaagcacatcattgttgatgaatatcaggac
gttaacctgatacagcatgacatgacccgcttgctatctaagtcggatacgtcggttatg
gctgttggtgatgttaaccagtgtatttatgagtggcgtggtgctcgaccagactttatc
ggcggactgtttgaaaggcactacccgaatacgaaggtgtttcaactgtcatgcacgttc
agatttggccatgagctttccttgatggctaactcggtaattcggcgcaactctacaaag
ctgaccaagctttgtgtcagtcatcctagcacccccaaaacagaggtcagattgcacttt
gataactgcctatccaaggtgctatcaaacctctcggtgagcagtggaacacaagccata
ttgtcccgcactaaggcgaaccttgctgaggcggaaattgttttacgcctgtgtgggcta
ccttatcgctacctcaatggttcaagcgcattacacacccgcaccgaaatcgggatactg
gtagttggcgtcttgctgtctgtgtacggcgatctgcggctactggaaaaccatcccaac
aaacaagcgattgtttacggctttctgaaggaggctggttttagctggcagaaagggcaa
ttcaaagcggcgctcagtggattgatggctccgcacgccgacctatggtctgctctaggt
cagttattcgagggcgcacaataccaaaaagatcggctgggcaggctcgccactatctgc
cagaaagacggagaggaaacgcctgctatcgatgtgttacgacgcctgagtatggagggt
ttcattgatagtgttggctctgagggtgtaactcgcactggatcgaacgaccagcaacga
ggggtcgtgaggatcggggagctacttgactccagtaagatcgattcccgcacgttttta
aaccttatcttgaatccaggcgaggctgctactgactgcgatcccttcatcctttccaca
ctgcatggttccaaggggctggagtgggataacgtaatactgatcgggctgaatgagcag
gaatttcctggcggcaaacccgatgatgtttacagcgttcgcacatcgatgaacacccct
ccggccgaagaggaaatcgaggaggaacgtcggctgttttatgtcggtatcactcgcaca
aaacagcagctaaatctggtggtccctcttgatgaagggcttgcgcggtggctcaaaaac
cgctgggatagcaccccgaagaagtcaccgatagctactcgcttcgtctatgaggctggc
tggactgcttgtgctgttaccagtgatgcgatctataacagcacggtagagaaacagaag
gctgacttcagcaagtttcaccaatggtatctaagagatcttcagcggctaaaagtctag
DBGET
integrated database retrieval system
